Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0104 |
Symbol | |
ID | 6876054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 96656 |
End bp | 97792 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642787983 |
Product | protein of unknown function DUF214 |
Protein accession | YP_002218572 |
Protein GI | 198282251 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.33773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGCC TGCTCCGCAT CGCCCTGAAA CTGCTGCTCA ACGACAAAGG CAAATTCGCC ACCCTGGTCA TCGGCATCAC CTTCTCCGTC TTTCTGATGA TGCAGATGAC CTCCATGTTT TCCGGGATAC TCTATCAATC CGCGGCCAAC ATCGTGAATG TCGGTGCCAG GATGTGGGTG ATGGACCCCG CCGTCCGAAC CCCGCAAAAC AGTATCCCCA TGCCCAACTA TGTGCTGGAC GCGGTGCGCA GCATACCCGG CGTCAAGTTT GCGGTGCCCT TTTATGTGGG TGCGGGCCTC GTCAAGCTCA ATGACGGCAC CTATCAGTCC GCCACCATCA TCGGTCTGGA CGACGCCAGC CTGTTCGGCC GACCGACGAT CATCTCCGGC AATATTCTGG ATATTTACAG GAACAACGCT TTCATCATGG TCAAGGACGC CAACTACGCC AAACTGGGCA GCCCCAAAAT AGGCACCAGC TTTGAGATCA ATGATCATCG CGCGGTTGTC GTAGCCCTGG CCCACACCCC GGTGTCCGGC CTGTTCGGTT TGCCGACCCT GTATACCACC TATAACCGCG CCACCCAGGA CCTGCCCTCC ACCCGCTACC TGATTTCCTA CATCCTGGTG CAGCCCAAAA GCACCCGGGA TATCGCCGCC ATCGAGCAGC AGGTAAAGCA ACTGGGCTAT CTGGCCTTGA CCGATCGGCA ATTCATCACC CGCAACGACC GGTTCTATGA ATTTCAGACC GGGATGGGCA CCAGCATCCT GATCATGACT CTGATCAGTT TTCTCGTAGG ACTATCCATC GCCGGAGAGA CCTTTTACAT GTTCGTTCTG GACAATCTGG AGCATTTCGG CGCTCTCAAG GCCATTGGCG CCAAAAGCGG CGAACTGATC CAGATGATCG TCTTTCAGTC GCTGGTCGTG GGGTTCCTGG GTTTCGGCTT CGGCGTGCTG CTGTCTTCCA CCATGATCGC CATCTCCAAA GTGGAGATCG CCAACTACGC CGCCATGGTC ACTTACGAAA ACCTGTTTCT GGCCCTGATC ATGGTCCTGA TCATTTCCGC CTTTTCGAGC TATATCGGCA TTCGCAAGGT CATCCGCATC GACCCCTTTG ACGTCTTCCG GGGTTAG
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Protein sequence | MNGLLRIALK LLLNDKGKFA TLVIGITFSV FLMMQMTSMF SGILYQSAAN IVNVGARMWV MDPAVRTPQN SIPMPNYVLD AVRSIPGVKF AVPFYVGAGL VKLNDGTYQS ATIIGLDDAS LFGRPTIISG NILDIYRNNA FIMVKDANYA KLGSPKIGTS FEINDHRAVV VALAHTPVSG LFGLPTLYTT YNRATQDLPS TRYLISYILV QPKSTRDIAA IEQQVKQLGY LALTDRQFIT RNDRFYEFQT GMGTSILIMT LISFLVGLSI AGETFYMFVL DNLEHFGALK AIGAKSGELI QMIVFQSLVV GFLGFGFGVL LSSTMIAISK VEIANYAAMV TYENLFLALI MVLIISAFSS YIGIRKVIRI DPFDVFRG
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