Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0058 |
Symbol | |
ID | 6876007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 62103 |
End bp | 63200 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642787937 |
Product | quinolinate synthetase |
Protein accession | YP_002218527 |
Protein GI | 198282206 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0379] Quinolinate synthase |
TIGRFAM ID | [TIGR00550] quinolinate synthetase complex, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000714365 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGTGG AAACGGTGAG GATTCAGGGG CTGCGGAGCA GTGACGCGGC GGAATTGGAT GCGCGAATCC GGCGGGCCAA GGCTGCGCTG GGCAAGCGTG CGGTCATTCT CGGCCACCAC TATCAGCGCG AAGAAGTCTA TCGCCACGCC GACTTTCATG GCGACTCCTT GCAACTCTCC CGTGCTGCCG CCGAGCAGGA GGCCGAGTTC ATCGTCTTCT GCGGCGTTCA TTTCATGGCC GAAGTGGCCG ATATCCTCAG CCGCCCGGAA CAGGCGAGCA TCCTGCCGGA CCTCAATGCT GGCTGCTCCA TGGCCGATAT GGCCGACATG CCCCAGGTGC AGCGTGCCTG GGAGGAGCTG GCGACGGTGA TCGATGTGGA GCAGGAGGTG ACACCGGTCA CTTACGTGAA CTCTTCGGCC GCGCTCAAGG CCTTCTGCGG TGTCCACGGC GGTACCGTCT GCACCTCCTC CAATGCCCGC AAGGTGCTCG ACTGGGCCTT CGGGCAACGC CCCAAGGCCC TGTTTTTCCC GGATCAGCAT CTGGGACGCT GGACCGGGTA CCAACTGGGC ATTCCCCTGC GCGACATGCC GGTCTGGGAC CCCAGCCTGC CGCTGGGCGG CCTCACGCCG GAAGAAATCC GTCGTGCCAG AATCCTGCTC TGGAAGGGGC ATTGCTCGGT CCACCAGATG TTTCAGCCGG CCCACATCGA ACGCTGGCGC CGCGAGCATC CCCAGGGGCA GGTGATCGCC CATCCGGAGG CGTCTTTTGA AGTCTGCCAG ATGTCCGATG CCGTCGGTTC CACGGATTTC ATCCTGCGCA CGGTCAAGGC CTCGCCACCC GGCAGTGCGT GGCTGGTGGG CACGGAAATC AATCTGGTCA CCCGCCTGGC CAGCGAGGTG CGCGCCGAAG ACAAGACCGT GGAGTTCATG TCGCCCATGG TCTGCATGTG CTCCACCATG TTCCGCATCG ACCCGGAACA ACTGGCGTGC TCGCTGGAGA GTCTCCTCGC GGGCCAGGTG GTCAACCGCA TCCAGGTGGA CCCGGAGACC GCAGCGCAAG CCCGGCTGGC GCTGGAGCGC ATGCTGGCGG TTTCCTGA
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Protein sequence | MGVETVRIQG LRSSDAAELD ARIRRAKAAL GKRAVILGHH YQREEVYRHA DFHGDSLQLS RAAAEQEAEF IVFCGVHFMA EVADILSRPE QASILPDLNA GCSMADMADM PQVQRAWEEL ATVIDVEQEV TPVTYVNSSA ALKAFCGVHG GTVCTSSNAR KVLDWAFGQR PKALFFPDQH LGRWTGYQLG IPLRDMPVWD PSLPLGGLTP EEIRRARILL WKGHCSVHQM FQPAHIERWR REHPQGQVIA HPEASFEVCQ MSDAVGSTDF ILRTVKASPP GSAWLVGTEI NLVTRLASEV RAEDKTVEFM SPMVCMCSTM FRIDPEQLAC SLESLLAGQV VNRIQVDPET AAQARLALER MLAVS
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