Gene Lferr_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0048 
Symbol 
ID6875997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp53012 
End bp53530 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content57% 
IMG OID642787927 
ProductRedoxin domain protein 
Protein accessionYP_002218517 
Protein GI198282196 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0534182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAA CGGTTTGGCC TATGGCCAAA GTGGCCATCA TCGCGATGAT CGGCGCATTC 
CTGCTGTGGA TCAGCCTTAT CAAGCCCATG CTTCATAAGT CCGATGTGGC AACGGCAACC
ATTCCGCTGG TGAATGGCAA AACCTTGGAT GTAACGGCGC TGCGCGGCAA GGTCGTGGTA
TTGAATTTCT GGTCTCCCGA TTGCCCGCCC TGTATCCAGG AACTGCCCGA TCTGGAACGA
CTTTATCAGA CCTACCGCGC GCAGGGTCTG GTGGTGGTAG GCATCGCCAC GCCGGGATCG
TCCAGGTCCA GAAGCCTCGC CGCCGCAGCC ATGGCCCACG TGACTTATCC TTTATCTGTG
GATCAAAATG GCACCCTCAC CCGTGCAGTG GGCGGAATCA TGGTTACACC CACACAGGTA
ATCATCGACA GGGAAGGGCG GGTGATCGAC AAATACCAGG GCGTCGTTTC CGGGGAGGAG
CCGATGGACG AGATTCTGCG GGCATTACAG CAGAAGTGA
 
Protein sequence
MSKTVWPMAK VAIIAMIGAF LLWISLIKPM LHKSDVATAT IPLVNGKTLD VTALRGKVVV 
LNFWSPDCPP CIQELPDLER LYQTYRAQGL VVVGIATPGS SRSRSLAAAA MAHVTYPLSV
DQNGTLTRAV GGIMVTPTQV IIDREGRVID KYQGVVSGEE PMDEILRALQ QK