Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0041 |
Symbol | |
ID | 6875990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 45417 |
End bp | 47072 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642787920 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002218510 |
Protein GI | 198282189 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCGTA TCTTCGCCGC TCCGGGTATC TGCTTGGCCG TTCGCCCTGT TTCTCCAGAC GCCGTCGCTG ACCCCACATT TACCAGGGTA GATAGCGTGC TGCTGTTGCT GGGCCTGAGC AGCGGCCTGC TGCTGGCTTC GTGGAGCCTC GCCTGGTCCA TCCCGATGCT GCCGTACATC GCTGGCGCCT ACAGCACCAG CCTCGACCAC GCGATCTGGT CGCTGACTTT TTACCTGCTG GCCTGGGCGC TCGCGGTGGT ACCCGCGACC TGGCTCTACC AGCGTTTCGG TGAACTGCGG ATGTTTCAGA TCTCCCTCAC CCTGCTGATG GTGGCCACCC TGCCCGATGT CTTCAGCGAC CATTTCGGCT TATTTTTGGG CGGCAGGTTT GTGCAGGGCA TGGCGGCGGG TTTTCTGACG CCCCTGACCC GGCGACTGCT GATCCGCTAT GCGCCGTTGC GCTGGCAAAA GACGGCTGCC GATCTCAGCA TCGTCAATCT GGTGCTGCCC TTGCTTGCCG GGCCCTCGCT GGCGGGCTGG ATCGCCTATA CCTGGGACTG GCGGGCCGCG GCGGTGTTGA CCTTTCCCGT GGGTTTACTG GCGCTGGGCA TGGTCTCCGC CCTGTTGCGC GACAATCCCG AGGAACACCT GCGCCAACCC TTCGACTGGA TCGGGCTGGT GCTGCTCGCC GCATGGAGCG CCACCTTCCA GATCGTGCTC AACCGCGGCG AGGACTGGAA CTGGTGGGAT GCCCCCGCCA TCCGCTGGCT GACCGCGCTG GGCGCCGTGC TCCTCGTGGC CTTCTTCCTC TGGGAAAGGG ATCAACCGCA CCCCTGCCTG GACCTCCGCC TCCTGCGGCG ACGGAATTAC GTGCTGGCGC TGCCGGCGCT GGTTTTCGGG TGGGGACTGC TGCTGGGCGG GAACAGTCTT TTTGTCTCGG CCCTCATCAG TCATGCCAAC TATTCCGCTT TCTGGGCGGG CGTGGTGTTG CTGCCCATGG CCCTCGGCGG CGTGCCACTG ATCGCGGTGA TGGGACCCAT CTCGCACCGG GTGAATCCGC GCTGGCTGGC AACCATCTGC TTTGGATTCG TCGCCATTTA TGGATTCACC ACTCGGCTCA ACCTGCACAG CAATCTGCGC AGCCTGCTTC TCAGCCATTT GATCGAAGGC GTCGCCATCG GGTTTTATCT GGTACCCCTG AGCTTGATCA TGTTTTCACG GCTGCCCCAG AGCCGCCTGC CCGCGGCGGC CACCTTGCAG AACTTCGTGC GGATTCTCGG CGGCGCTTAT CTGTCCAGCG CTTTCTCGGC GCTGTGGATG CGTCATGGCG ACACCTTCAG GGCGCATCTG ACCTGGCAAT CCCCCACTTT GCCCCTGCAA AGCATGCTGG AGCACTGGCC CGTAAGGGGC TCCGCAGCGC GGGCCCTGTC CATCCAGCAC CTGACCACCC AGAGTGCCGC ACTATCCATG CAATCCATGC TCTGGCTCTG GGGCTGGATG GCGCTGGTTG TGCTTGCCCT CGTATGGCTC ACCAAAGGGC CATATCGCCG CAGGGCAGGG CAGGTTCGGC GGGTCACCAT CGAGCAGCAG ATCATGGAAA GCGCCGGTTT TGACGCGGAG CCGAGTCGGC GGGAGGATGT GGAACGTGCA CCGTAA
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Protein sequence | MHRIFAAPGI CLAVRPVSPD AVADPTFTRV DSVLLLLGLS SGLLLASWSL AWSIPMLPYI AGAYSTSLDH AIWSLTFYLL AWALAVVPAT WLYQRFGELR MFQISLTLLM VATLPDVFSD HFGLFLGGRF VQGMAAGFLT PLTRRLLIRY APLRWQKTAA DLSIVNLVLP LLAGPSLAGW IAYTWDWRAA AVLTFPVGLL ALGMVSALLR DNPEEHLRQP FDWIGLVLLA AWSATFQIVL NRGEDWNWWD APAIRWLTAL GAVLLVAFFL WERDQPHPCL DLRLLRRRNY VLALPALVFG WGLLLGGNSL FVSALISHAN YSAFWAGVVL LPMALGGVPL IAVMGPISHR VNPRWLATIC FGFVAIYGFT TRLNLHSNLR SLLLSHLIEG VAIGFYLVPL SLIMFSRLPQ SRLPAAATLQ NFVRILGGAY LSSAFSALWM RHGDTFRAHL TWQSPTLPLQ SMLEHWPVRG SAARALSIQH LTTQSAALSM QSMLWLWGWM ALVVLALVWL TKGPYRRRAG QVRRVTIEQQ IMESAGFDAE PSRREDVERA P
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