Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_0032 |
Symbol | |
ID | 6875981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 36399 |
End bp | 37754 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642787911 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_002218501 |
Protein GI | 198282180 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.189606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTATC AGCAGGGAGA CACTATCGTG GCGATTGCCA CGCCGCCGGG AGAAGGCGGT GTCGGCATTT TGCGCTTCTC CGGACCACAG GCGCCGTCCA TCGCGACGGC GCTCTGCGGC CGGCGGTCCG CCAAACCGCT GACACCCCGT CATGCTCATT TTCGCCGCTT TTACGCCCGC GACGGCAGCC TGATCGATCA CGGCATTGTC CTCTATTTTC CAGCCCCGAA CAGCTACACC GGCGAAACCG TCGTGGAATT GCAGGGCCAT GGCAGCCCGC TGGCCCTCGC CAGCCTGCTC ACCGAGGCTA TCGCCCTTGG CGCACGGGCG GCGCGTGCCG GGGAGTTCAG CGAACGGGCC TTTCTCAATG GCCGGCTTGA TCTTGCCCAG GCCGAAGCGG TGGCCGACCT CATCCACGCC CGCAGCGATG CTCAGGCACG AGCCGCGGCA GCGAGTCTGG AGGGCGCCTT TTCACAAGCC GTCGATGACA TTCACGGCCA GCTCCTGCGC CTTCTCGCTC TCGCCGAAGC CGGACTGGAC TTCAGTGAAG AAGACCTTGG CGATGCCCAT GCGCAGGCCA TCAGCGACAG CCTGGTACGG CTGGATGCTC AGGTCGCCCA TCTGCTCAAG CAGGCACAGC AAGGCGCCCG ACTCGCCCGC GGCGGTCGCG TGGTGCTCGC CGGACGACCC AACGTCGGCA AGTCCAGCCT GATGAACGCC CTCGCCCGGC GCGAGTCAGC CATTGTCACC GCCATCCCCG GCACCACCCG CGACCTGCTC CGAGAGGAGA TCATCCTCGG CGGACTGCCG GTGGAACTCG TCGACACCGC GGGACTGCGC GAGGCGACGG ACGCCGTGGA GGCGGAGGGC GTCGCCCGCG CCCGCAACAT ATTGCACAGC GCACAACTGA TCCTGCTGGT GGCTGATGCG AGCACGGGAT GGCAATCGGA GGACGAAGTC ATCCTGCGCG ACCTACCGGA AGGACCGCGC CGCATCATCT GGAACAAAAT GGATCTGGTT TCCGCACCAC CCGCCACCCC GACGGGTGAG GAAGCCATAA CACTCTCCGC CCAAACCGGC GCAGGTCTCG ATACATTACA CTGCAGCCTG ATTGAAGCAC TGGGGGTGCA GGGCGACAGT TGCCCCTTCA GCGCGCGCCG TCGCCATGTC GAAGCCCTGG AAAGCTGTGC GCACCGGCTC GGCATCGCAG GTGACACGCT CCGCCTGGGA GATGCCCCGG AACTGGTCGC CCAGTCCCTG CGTGAAGCCG CGGCAGCGTT GGCCGGCATC ACCGGCCACA TGGACGTGGA AGACATTCTC GGCGAGATTT TTTCGCGCTT TTGCATCGGG AAATAA
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Protein sequence | MDYQQGDTIV AIATPPGEGG VGILRFSGPQ APSIATALCG RRSAKPLTPR HAHFRRFYAR DGSLIDHGIV LYFPAPNSYT GETVVELQGH GSPLALASLL TEAIALGARA ARAGEFSERA FLNGRLDLAQ AEAVADLIHA RSDAQARAAA ASLEGAFSQA VDDIHGQLLR LLALAEAGLD FSEEDLGDAH AQAISDSLVR LDAQVAHLLK QAQQGARLAR GGRVVLAGRP NVGKSSLMNA LARRESAIVT AIPGTTRDLL REEIILGGLP VELVDTAGLR EATDAVEAEG VARARNILHS AQLILLVADA STGWQSEDEV ILRDLPEGPR RIIWNKMDLV SAPPATPTGE EAITLSAQTG AGLDTLHCSL IEALGVQGDS CPFSARRRHV EALESCAHRL GIAGDTLRLG DAPELVAQSL REAAAALAGI TGHMDVEDIL GEIFSRFCIG K
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