Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_4373 |
Symbol | |
ID | 6161183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4891326 |
End bp | 4892645 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641667150 |
Product | ammonium transporter |
Protein accession | YP_001793389 |
Protein GI | 171061040 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.679539 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTCC CCTCCGCCGC GACCCGCGGC TGCCTTGCCG CCTCGGCCTG GCTTTCCTGC GCCAGCGCCG CCGCGCAGCC GGCCGCGCGG GGGCTGCAAT CGGCCGCCGT CATCGACAGC GGCGACACCG CCTGGATGAT GGCCGCCACC GCGCTGGTGC TGCTGATGAG CATCCCGGGC CTGGCGCTGT TCTATGCCGG CATGGTGCGC AAGAAGAACA TCCTGGCGAC GATGGCGCAG GTGCTGGCGG TGTGTGCGCT GGTCAGCCTG CTGTGGTTTG CGCTCGGCTA CAGCCTGGCG TTCCGGCCCG GCTCGCCGTG GCTGGGCGAC ACCGCCGGCG CCTGGCTGGC CACGCTGCAT TTCGACCAGG CGCGCGGCCA GCTGAGCGTG CACCCGCTGG CGCCGACGGT GCCCGAGTCG GTGTTCGTGA TGTACCAGAT GAGCTTCGCC ATCATCACGC CCGCCCTGAT CGTGGGCGCG TTCGCCGAGC GCATGCGTTT TGCCGCCCTG TTGTGGTTCA TGGCGCTGTG GTCGCTGGCG GTCTACGCGC CGATCGCGCA CTGGGTGTGG GCGCCGGGCG GCTGGCTGGG CGCGATCGGC GCGCTCGACT TCGCCGGCGG CACCGTCGTG CACCTGAACG CCGGCATGGC CGGGCTGGTG GCGGCCTGGA TGCTGGGCCG GCGCATCGGC TACGGCGAGC TGGCGCTGAC GCCGTCGAAC CTGGGCTACA CGATGGTCGG CGCGGCGCTG CTGTGGGTCG GCTGGATGGG CTTCAACGGC GGCTCGGCCT TTGCCGCCGA CGGCCGCGCC GGCATGGCGA TGCTGGCCAC CCAGCTCGCC GCCGCCGCCG CCACGCTGAG CTGGATGCTG GCCGAGTGGC TGGTGCGCCG CACGCCCACG CTGCTGGGCC TGTGCAGCGG CGCCGTGGCC GGCCTGGTGG CGGTCACGCC GGCTTCGGGT TACGTGACAC CCGCCTCGGC GGTGCTGATC GGCGCGGCGG CCGGTGTCGG CTGCTACTGG GGCGCGACCG GCCTCAAGCG CTGGCTCGGT GCCGACGACT CGCTCGACGT GTTCGGCGTG CACGCCGTCG GTGGCCTGAT CGGCGCGCTG CTCACCGGCG TGCTGGCCGA CCCGCGCATC GGCGGCGTGA CCGGCTCGCT GCAGGCGCAG GCGGTGGCTG CGGGCGCCAC GCTGCTCTAC AGCGGCGTGG TCACGGCGGC GATCCTGTGG GCGGTCGACG CCGTGATCGG CCTGCGCGTC ACGGCCCGCC AGGAACACGC CGGGCTCGAT CTCAGCCAGC ACGGCGAGCG GGTCGAATGA
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Protein sequence | MRFPSAATRG CLAASAWLSC ASAAAQPAAR GLQSAAVIDS GDTAWMMAAT ALVLLMSIPG LALFYAGMVR KKNILATMAQ VLAVCALVSL LWFALGYSLA FRPGSPWLGD TAGAWLATLH FDQARGQLSV HPLAPTVPES VFVMYQMSFA IITPALIVGA FAERMRFAAL LWFMALWSLA VYAPIAHWVW APGGWLGAIG ALDFAGGTVV HLNAGMAGLV AAWMLGRRIG YGELALTPSN LGYTMVGAAL LWVGWMGFNG GSAFAADGRA GMAMLATQLA AAAATLSWML AEWLVRRTPT LLGLCSGAVA GLVAVTPASG YVTPASAVLI GAAAGVGCYW GATGLKRWLG ADDSLDVFGV HAVGGLIGAL LTGVLADPRI GGVTGSLQAQ AVAAGATLLY SGVVTAAILW AVDAVIGLRV TARQEHAGLD LSQHGERVE
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