Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_4329 |
Symbol | |
ID | 6164055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4843130 |
End bp | 4844293 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641667106 |
Product | oxidoreductase domain-containing protein |
Protein accession | YP_001793345 |
Protein GI | 171060996 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.173882 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA ACAGCTTCAA ACGCCCCTTG CGATGGGGTT TGGTGGGCGG CGGGCAGGGC GCCTTCATCG GCGCGGTGCA CCGCATCGCG GCGCGGCTGG ATGGGCAGTA CGTGATGGTG GCGGGCGCGC TGTCGTCCGA CCCACAACGC GCCCGCGCGA GTGGCGCCGA GCTGGGTCTG GCACCCGATC GCTGCTACGC CGACTACCGC GAGATGGCGC GTGCCGAGGC TGCAAGGCCC GACGGCATCG AGGTGGTTTC GATCGCCACG CCCAATCACC TGCACCACCC GGTCGCCTGC GCCTTCATCG ACGCCGGGAT CCACGTGCTG TGCGACAAGC CGCTCACCAC CACGTTGGCC GATGCGCTGG ATCTGCGTGA ACGCGTCAAG ACACGCGGCG TGCGTTTCGG CCTGACGCAC AACTACAGCG CCTACCCGCT GGTGCGCGCC GCACGCGCGA TGGTGGCGGC CGGCGAGCTG GGCGAGATCC GCATCGTGCA GGTCGAATAC ACGCAGGACT GGCTCGCCAC GCCGCTCGAA GCCACTGGCC ATGTCATTGG ACACAAGCAG GCCTCGTGGC GCACCGATCC GGCGCTCAAC GGCCCGGCCG GTGCGCTGGG CGACATCGGC ACGCACGCCG CGCAACTGGC CGAGTTCATC AGCGGCATGG CCCCCGCCGA GCTGAGTGCC GACGTCACCA CCTTCGTCGC CGGCCGGCGG GTCGACGACC ACATCCAGGT GCAGCTTCGT TATGCCTCGG GCGCACGCGG CCTGCTGTGG GCCAGCCAGG TCGCGTGTGG TGAAGAGAAC CACCTGCGCA TCCGCATCTA CGGCACCCAG GCCGCGATCC ACTGGGATCA GGAACAGCCC AACGAGCTGA CCTTTCATCC GGCCGGACAA CCCGCCCGGC GCCTCACGCG CGGCATGGCG GGGTTGCCAT CGGTGGCGGC CGAAGCGACC CGCATCCCCA CCGGCCATCC CGAGGGCTAC CTCGAAGCCT TCGCCCAGCT CTACCGCGAT TTCGCGCAGG ACGTGCGCGA CGCGCAAGCG GGCCTGATCA CACCCGCGCG CGTACCCGGC CTCGACGACG GCGTGCGCAG CATGGCCTTC GTCGAAGCGG TGCTGCGCAG CGGCGCGGCC AATGCGGCCT GGACCGCACT CTGA
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Protein sequence | MSDNSFKRPL RWGLVGGGQG AFIGAVHRIA ARLDGQYVMV AGALSSDPQR ARASGAELGL APDRCYADYR EMARAEAARP DGIEVVSIAT PNHLHHPVAC AFIDAGIHVL CDKPLTTTLA DALDLRERVK TRGVRFGLTH NYSAYPLVRA ARAMVAAGEL GEIRIVQVEY TQDWLATPLE ATGHVIGHKQ ASWRTDPALN GPAGALGDIG THAAQLAEFI SGMAPAELSA DVTTFVAGRR VDDHIQVQLR YASGARGLLW ASQVACGEEN HLRIRIYGTQ AAIHWDQEQP NELTFHPAGQ PARRLTRGMA GLPSVAAEAT RIPTGHPEGY LEAFAQLYRD FAQDVRDAQA GLITPARVPG LDDGVRSMAF VEAVLRSGAA NAAWTAL
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