| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4315 |
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| Symbol | |
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| ID | 6163098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4826967 |
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| End bp | 4828187 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641667092 |
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| Product | glucose sorbosone dehydrogenase |
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| Protein accession | YP_001793331 |
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| Protein GI | 171060982 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.748634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTCA CCACTGCCGA CCTGGCTCGC CCGAACCGCC GCGAGGCGAT CGTCCGCATC
GCCGCGCTGT GGGCCGGCGT CGGCGGCGCG ACGGTGCTCG GCAGCGGCTG CAACAGCGAT
GGCAACGGCA ATGCGGCACC GGCCGCCGCG CCCAGCGGCT TCACGCCGGT CGTCACCACG
CTCACCAGCG CCCTGTCCAG CCCGTGGGGG ATGGATTTCC TCCCCGACGG CCGCATGCTG
GTCACGCAAA AGGGCGGCTC GATGGTGATC CTGAGCGCCG ACGGGAGCAG CATCGTCGGC
AACGTCAGCG GTGTGCCGGC GGTGGTGTCG GCCGGCCAGG GCGGGCTGCT CGATGTCGTG
CTCGACCCCG ATTTCGCGAC CGACCCGTGG GTCTACTGGG CGTACGCCGA AGCGGGCACC
GGTGGCAGCG GCACGGCCGT GGCGCGTGGC CGGCTGGTCG GCGCCGCGCT GCAGGACGTG
GCGGTGATCT TCCGCCAGGC GCCCAAGCGG TCGGGCAGCA GCCACTTCGG CTGCCGGCTG
GTGTTCCGGG CCGACAAGAC GCTGTTCATC ACGCTGGGCG ACCGCCAGGC CGACAGCCCC
TCGAACCCGA CCGCCGACCA CGCGCAGAAC CTCGCCAGGA CGCTCGGCAA GGTGGTGCGC
ATCCGGCGCG ACGGCAGCAT CCCCGGCGAC AACCCGCGCT TTGCCGCGGC GGGCGCCTTG
CCGGGCATCT GGAGCTACGG CCACCGCAAT CCGCAGGGTG CGGCGATCCA TCCGACCACA
GGCGAGCTGT GGCTGGTCGA ACACGGCCCG CAAGGCGGCG ACGAGCTCAA CCGCGTGCTG
CCCGGCCACA ACCACGGCTG GCCGCTGCGC AGCTACGGCT GCCCCTACGG CTCGTTTCCC
GGCGCGGGCT GCCAGGTCGC CGGCGGCACC CACGCGCCCG ACTACGACGA GCCGGTGTCG
TACTGGGTGC CGACCTCGAT CGCGCCGTCG GGCCTGGCCT TCTACAGCGG CGACAAGTTC
CCCGAGTGGC AGGGCAACGC CTTGCTCGGC GCGCTGGCCG GCACGGCGCT GTGGCGGGTG
GTGCTCGACG GCAACGCCGA GGTCGGGCGC GAGCGCCTGC TGGCGGATCT GGGCGAGCGC
ATCCGCTGCG TGCGCCAGGG GCCCGACGGC TGGCTCTATC TGCTGACCGA CAGCGGCCGG
CTGCTGCGGC TGACGCGCTA G
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| Protein sequence | MSLTTADLAR PNRREAIVRI AALWAGVGGA TVLGSGCNSD GNGNAAPAAA PSGFTPVVTT
LTSALSSPWG MDFLPDGRML VTQKGGSMVI LSADGSSIVG NVSGVPAVVS AGQGGLLDVV
LDPDFATDPW VYWAYAEAGT GGSGTAVARG RLVGAALQDV AVIFRQAPKR SGSSHFGCRL
VFRADKTLFI TLGDRQADSP SNPTADHAQN LARTLGKVVR IRRDGSIPGD NPRFAAAGAL
PGIWSYGHRN PQGAAIHPTT GELWLVEHGP QGGDELNRVL PGHNHGWPLR SYGCPYGSFP
GAGCQVAGGT HAPDYDEPVS YWVPTSIAPS GLAFYSGDKF PEWQGNALLG ALAGTALWRV
VLDGNAEVGR ERLLADLGER IRCVRQGPDG WLYLLTDSGR LLRLTR
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