| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4298 |
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| Symbol | |
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| ID | 6161782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4808416 |
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| End bp | 4809255 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641667075 |
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| Product | IclR family transcriptional regulator |
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| Protein accession | YP_001793314 |
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| Protein GI | 171060965 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCC GCGAACCCAA GCTCCCTGCC GATCCGGATG CGGCCGCCGC GGCCCTGGAC
GGCGCCACCC CGCGCGAGCA ACGCGGCATC CAGAGCGTGG AAGTCGGCGG GCAGCTGCTG
CGCGCCCTGG CCCACTACGG CCGGCCGATG CCGCTGAAGG ACCTGGCCCG CGAAGCCGGC
ATGGTGCCGG CCAAGGCGCA CCCCTACCTG GTGAGCTTCG GCAAGATCGG GCTGGTCGAG
CAGGACAAGG TCAGCGGCCG CTACGGCCTC GGGCCCCTGG CCCTGCAGCT CGGGCTGATG
AGCCTGCAGC AGGCCGACCC GGTGCGCATC GCCGCGCCGC TGCTGCCCGA ACTGGCGCAG
CTCACGGGCG AGACGGTGGC GCTGGTGGTG TGGGGCAACC GCGGGCCGAC CATCGTGGTG
GTCGAGGAAT CGCCGCAGGT GCTGCACGTC AACATGAACC ACGGCACGGT GTTCTCGATC
GCCGACACGG CGTCGGGCCG CCTCTACGGC GCCTACCTGC CCAAGGAGCT GGTGCGGCCG
ATGTACGAGC AGCAGCGCCG CACCGCCGAG CGTGGCAGCC TGCCCACCTG GACGGAATTC
GCCGCCACGC TGGAGGCCGT GCGCGCGCAG GGCATGAGCC GCTCCGAAGG CACGGTGGTG
GCGGGCGTGA GCGCGCTGTC GGCGCCGGTG TTCGACCACC GCGGCCAGAT CGTGCTGGCC
GTCACCTGCG TCGGCACCTC CGCCGCCTTC GACAGCCGCT GGGACGGCCC GGTGGCCCTG
GCGCTGCGCA GCTGCGCGGA CAGGGTGTCC GAGCGGTTGG GCTGGCGGCC TCAGCCTTGA
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| Protein sequence | MPAREPKLPA DPDAAAAALD GATPREQRGI QSVEVGGQLL RALAHYGRPM PLKDLAREAG
MVPAKAHPYL VSFGKIGLVE QDKVSGRYGL GPLALQLGLM SLQQADPVRI AAPLLPELAQ
LTGETVALVV WGNRGPTIVV VEESPQVLHV NMNHGTVFSI ADTASGRLYG AYLPKELVRP
MYEQQRRTAE RGSLPTWTEF AATLEAVRAQ GMSRSEGTVV AGVSALSAPV FDHRGQIVLA
VTCVGTSAAF DSRWDGPVAL ALRSCADRVS ERLGWRPQP
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