| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4274 |
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| Symbol | |
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| ID | 6161222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4782621 |
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| End bp | 4783484 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641667051 |
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| Product | transketolase domain-containing protein |
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| Protein accession | YP_001793290 |
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| Protein GI | 171060941 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3959] Transketolase, N-terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGA CAACCGCTGA ACGGGCCGAA CTGGCCGAGC TTCGACAAGT GGCCTACCGC
ATCCGCCGCA ATGCCTTGCG CATGGGCGAG GTGCAGGGCC AGGGCTACAT CGGCCAGGCG
CTGGGCTGGG CCGACGTGCT GGCGGTGGCC TACGGCCACG CACTCAACCT GCGCCCCGAC
GAACCCGAAT GGGAGGGCCG CGACCGCTTC CTGCTCTCGC ACGGCCACTA CGCGATCGCG
TCCTACGCCG CGCTGATTGA GGCCGGCATC ATCCCCGAGA GCGAACTCGA AACCTACGGC
AGCGACGACA GCCGCCTGCC GATGTCGGGC ATGGCGACCT ACACGCCCGG CATGGAGATC
TCGGGCGGCT CGCTGGGCCA GGGCCTGGCG ATCGGCGTGG GCATGGCGCT GGGCCTGAAG
CACAAGAAGA ACCCGGCCTT CATCTACAAC TCGATGTCCG ACGGCGAGCT CGACGAGGGC
GCGGTCTGGG AGGCCGCGAT GGGTGCCGCG CACCACCGCC TGGACAACCT GATCTGCCTG
ATCGACATCA ACAACCAGCA GGCCGACGGC CCGTCGTCGA AGGTGATGGG CTTCGAGCCG
CTGGCCGACA AGTGGGCCGC CTTCGGCTGG CACGTGCAGC GTGTCGACGG CAACGATCTG
GCGGCGGTGC TGGAGGCCTT CGACGCCGCA CGCAACCTGA CCGAAGCCAA GCCGCGCGTG
ATCCTGTTCG ACACGCTGAT GGGCAAGGGC GTGCCCTTCC TGGAGACGCG CGACAAGAAC
CATTTCATCC GCGTCGACCC GCCGGAGTGG CAGCAGGCCC TGCAGATCCT GGATCAATCG
CAAGCTGAAG GAGCGCAAGC ATGA
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| Protein sequence | MTTTTAERAE LAELRQVAYR IRRNALRMGE VQGQGYIGQA LGWADVLAVA YGHALNLRPD
EPEWEGRDRF LLSHGHYAIA SYAALIEAGI IPESELETYG SDDSRLPMSG MATYTPGMEI
SGGSLGQGLA IGVGMALGLK HKKNPAFIYN SMSDGELDEG AVWEAAMGAA HHRLDNLICL
IDINNQQADG PSSKVMGFEP LADKWAAFGW HVQRVDGNDL AAVLEAFDAA RNLTEAKPRV
ILFDTLMGKG VPFLETRDKN HFIRVDPPEW QQALQILDQS QAEGAQA
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