| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4237 |
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| Symbol | |
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| ID | 6161126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4746863 |
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| End bp | 4748032 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641667014 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_001793253 |
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| Protein GI | 171060904 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.507304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGAT CCCATCCCTT GCCCCGCCTG CTGGCCACGC TGGCGCTTGG CCTGAGCCTG
AGCCTGAGCT TCGGCGCCCT GGCGCAGACC GCGCCGCCCG AAGTGGCGGC ACGCGCCTAC
CTGCTGCTCG ACGTCAGCGC CAACCAGGTG CTGGCCGAGC GTGACGCCGA CGCCACCGTC
GAGCCCGCGT CGCTGACCAA GCTGATGACC GCCTACCTGG TGTTCCAGGC GCTGCGCGAC
AAGAAGCTCG CGCTCGAACA GGAGCTGACG GTGTCCGAGC GCGCCTGGCG CACCGGCATG
ACCGACACCT CGCGCATGTA CATCCAGGTC GGCACCAAGG TGAAGGTCGA GGACCTCATC
AAGGGCATGA TCGTGCAGAG CGGCAACGAC GCCACCGTGC AGCTGGCCGA GGCGGTGGGC
GGCACGCTCG AGAACTTCGT CGTGCTGATG AACCGGCAGG CACAGGCCTT CGGCCTGAAG
GTGACGCAGT TCAGGAACCC CGAGGGCCTG CCCGCGCCCG GCCATGTCAG CACCGCGCGC
GAGCTGTCGA TCATCGCCAG CCGGCTGCTG GTGGACTTCC CGGCCGAGGC GCGGTACTAC
ACGCTCAAGG AATTCACCTT CAACAAGATC AAGCAGCCCA ACCGCAACCT GCTGCTGTGG
CGCGACCCGA CGGTCGACGG CCTCAAGACC GGCTACACCG ACAACGCCGG CTACTGCCTG
ATCGCCACCG CCAAGCGCGA CCTGCCGGCC GGCCAGCGCC GGCTGGTCAG CGTGATCCTG
GGTGCGTCCT CGAAGGAAAG CCGCGCGACC GAAGCGCAGA AGCTGCTCAA CTGGGGCTAC
AGCGCCTGGG ACGCGATCAA GCTCTACGAC GCGCGGCAGA CCATCACCAC CGCGCCGGTC
TGGAAGGGCG CCAGCGCCAC CGCCAAGCTC GGCACGCTCG TGCCGCTGGT CGTCACGGTG
CCACGTGGCG AAGGCAGCCA GCTCAAGACC GAGATCACGC GCACCGACCC GCTGCTGGCG
CCGCTGACCG CCGGCCAGCC GGTCGGCACG CTGAAGGTGG TGTCGGGCAG CCGCGTGCTG
ACGCAGATGC CGGTCACCGT GACCGAGGAC GTGCCGGTCG CCGGCCTGTT CGGCCGCATG
TGGGACAGCG TGCGCCTGAT GGTGCGATGA
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| Protein sequence | MTRSHPLPRL LATLALGLSL SLSFGALAQT APPEVAARAY LLLDVSANQV LAERDADATV
EPASLTKLMT AYLVFQALRD KKLALEQELT VSERAWRTGM TDTSRMYIQV GTKVKVEDLI
KGMIVQSGND ATVQLAEAVG GTLENFVVLM NRQAQAFGLK VTQFRNPEGL PAPGHVSTAR
ELSIIASRLL VDFPAEARYY TLKEFTFNKI KQPNRNLLLW RDPTVDGLKT GYTDNAGYCL
IATAKRDLPA GQRRLVSVIL GASSKESRAT EAQKLLNWGY SAWDAIKLYD ARQTITTAPV
WKGASATAKL GTLVPLVVTV PRGEGSQLKT EITRTDPLLA PLTAGQPVGT LKVVSGSRVL
TQMPVTVTED VPVAGLFGRM WDSVRLMVR
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