Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_4228 |
Symbol | |
ID | 6160688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 4739007 |
End bp | 4739672 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641667005 |
Product | DSBA oxidoreductase |
Protein accession | YP_001793244 |
Protein GI | 171060895 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.210811 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGTC GAGATTTCTT GGCTCAAACC GCCGCCGTGC TGGGCCTGAC CGGCGTGGCG GGTCACGCCG CTGCGCAGTC CTTCCAGGAG GGCAAGCACT ACGTGCGCCT GTCGCAGCAG CTGTCCGTGA CGGCGCCCGA AGGCAAGATC GAGGTGGTCG AGTTCTTCTG GTACGGCTGC CCGCACTGCC ATGCGTTCGA GCCGACGCTC GACGCCTGGG CCCGCAAGCT GCCGGCCGAC GTGGCGTTCC GCCGCGTACA CGTGGGCTTT CGGCCCAACT TCGAGCCGCA GCAGCGCCTG TACGCCACGC TCGAGGCGCT CGGCCTGGTC GACAGCCTGC ACCGCAAGGT CTTCCATGCC ATCCACCAGC TGCGCCAGCG GCTCGACCGG CCGGAGGACA TCTTCGCTTT CGTCGAGAAG AACGGCGCCG ACCGCGCCAA GTTCGTCGAG ATGTACAACT CGTTCGGCAT GCAGGCCAAG GTGCGCCAGG GCAAGCAGCT GGCCGAGGCC TACAAGATCG ACGGCGTGCC GGCGCTCGGC ATCCACGGCC GCTACTACAC CTCGCCGGCG CTGGCCGGTG GCGACAACAC GCCCGAGCTC GAAGGCGGCC TGCGCGCGCT GGCCCTGACC GATCAGCTGG TGGCACGGGT GCGCAAGGGC GCCTGA
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Protein sequence | MDRRDFLAQT AAVLGLTGVA GHAAAQSFQE GKHYVRLSQQ LSVTAPEGKI EVVEFFWYGC PHCHAFEPTL DAWARKLPAD VAFRRVHVGF RPNFEPQQRL YATLEALGLV DSLHRKVFHA IHQLRQRLDR PEDIFAFVEK NGADRAKFVE MYNSFGMQAK VRQGKQLAEA YKIDGVPALG IHGRYYTSPA LAGGDNTPEL EGGLRALALT DQLVARVRKG A
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