| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4180 |
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| Symbol | |
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| ID | 6162232 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4688500 |
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| End bp | 4689822 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641666957 |
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| Product | putative RNA methylase |
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| Protein accession | YP_001793196 |
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| Protein GI | 171060847 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTGCC GCGCCGTGAA TCCGACCCCG CTCTACCTGC CCTGCGCCGC CGGCGTCGAA
CCCCTGCTGG CCGACGAGGT GCGCGCCATC CTGCGCGCCG CCGGTGCCGA GAAGGCCGCC
GAATCGGTGC AACCGGGCCG CGCCGGTGTC AGCCTGATCG GCAGCCCGGC CAGCGCGATG
CGCCTGCACC TCGAATGCCG GCTGGCCCAG CGCGTGCTGT GGCAGGTCGC CGAAGGCCCG
TACCACGACG AACACGACCT CTACGACCTG GCACGCAGCG TGGCCTGGGG CGACTGGATC
ACGCCGCGCC AGAGCCTGCG CGTGGACACC ACCGCCGTGC GCTCGCCGCT GCACAGCCTG
CACTTCGCCT CGCTGCGCAT CAAGGACGCC GTCTGCGACG CCATGCGCGA CAGCCACGGC
GAGCGCCCCG ACGTCGACCC GCGCCACCCC GACCTGCCGC TGGTGCTGCA CCTGAGCGAC
ACGCACGCCA CGCTCAGCAT CGACCTGAGC GGCGAGGCGC TGTTCAAGCG CGGCTGGCGC
GAGGTGCAGG GCGAGGCACC GCTGAAGGAA ACCCTGGCCG CCGCGATGCT GGCCGCCGCC
GGCTGGCAGG GCCGCGAGGC GGACGGCCCG CTGCTCGACC CCTGCTGCGG CGCCGGCACC
ATCGCGATCG AGGCCGCGCA GATCGCCTGC GGCATCGCGC CCGGCCTGCA GCGCACCTTC
GCCTTCGAGC GGCTGGCGCC GTTCCGCGCC GAGGCACAGG CCTGGCAGCA GATGAAGGCC
GAGGCCCGCG CCCGGGTGCA CGCGCCCGCA GTGCGGATCT ATGCTGGCGA CGTCTCGTTC
CGCATGACCG ACTTCGCCAC CCGCAACGCC GAACGCGCCG GCGTGCTGCA CGCGATCGAC
TTCAGGACCG GCGACGCGCT GCAGCGCCCG GCGCCGACCG AATCCGGCGT GCTGATGCTC
AACCCGCCCT ACGGCGAGCG CATCGACGCC AAGGGCAGCG GCGCCGCGCG GGCCCGCGAC
GAAGCGGGCG ACCGGCTCGG CCCGCGTGCC GATGCCGGCG CGCGCGAGGG CTTCGAGGGC
GGCGGCACCT CGGGCGCCTT CTTCTCGGCG CTGGCCGCGC ACTGGAAGCG CAACTACAGC
GGCTGGACCG CCTGGGTACT GAGCCCCGAC GCCAAGCTGC CGCAAGCCAT GCGCCTGAAG
GAAAGCCGCC GCGTGCCGAT GTGGAACGGC CCGATCGAAT GCCGGCTGTT CCGCTTCGAC
CTGGTCGCCG GCTCGATGCG CGGCCCGCGC AACGACGCGG CCGGTGCCGA CCTGTCCCGG
TGA
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| Protein sequence | MDCRAVNPTP LYLPCAAGVE PLLADEVRAI LRAAGAEKAA ESVQPGRAGV SLIGSPASAM
RLHLECRLAQ RVLWQVAEGP YHDEHDLYDL ARSVAWGDWI TPRQSLRVDT TAVRSPLHSL
HFASLRIKDA VCDAMRDSHG ERPDVDPRHP DLPLVLHLSD THATLSIDLS GEALFKRGWR
EVQGEAPLKE TLAAAMLAAA GWQGREADGP LLDPCCGAGT IAIEAAQIAC GIAPGLQRTF
AFERLAPFRA EAQAWQQMKA EARARVHAPA VRIYAGDVSF RMTDFATRNA ERAGVLHAID
FRTGDALQRP APTESGVLML NPPYGERIDA KGSGAARARD EAGDRLGPRA DAGAREGFEG
GGTSGAFFSA LAAHWKRNYS GWTAWVLSPD AKLPQAMRLK ESRRVPMWNG PIECRLFRFD
LVAGSMRGPR NDAAGADLSR
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