| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4168 |
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| Symbol | |
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| ID | 6162705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4671873 |
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| End bp | 4672973 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641666945 |
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| Product | hypothetical protein |
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| Protein accession | YP_001793184 |
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| Protein GI | 171060835 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3943] Virulence protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGGC CACCCGAGCC GTCAGTCGCT CCGACGGGTG GCGAATTCGT GCTGTTCCAG
ACCCAGGACG CCCAGACCCG CGTGCAGGTG CGGCTGATCG ACGGTGTGCT GTGGCTGACG
CAACGCCAGA TGGCCGAGCT GTATCAGAAG GACGTGCGCA CCGTCAGCGA ACACCTGAAG
AATGTCTACA CTGATGGTGA GCTGAACCCG GATTCAACCA TCCGGAAATT CCGGATAGTT
GCCCGCGAAG GTGCGCGGGA CGTGGAAAGG CTGGTCGACC ACTACAACCT GGATGCGGTG
CTGCAGGTGG GCTACCGGGT GCGTTCGCCG CGCGGCGCGC AGTTTCGCCA GTGGGCCACC
GAGACGCTCA AGAGCTACCT GGTCAAGGGT TTCGTGCTCG ACGACGAGCG CTTCAAGCGC
GGCGCCGATG CCGAATACTT CGATGAGCTG CTGGCGCGCA TCCGCGACAT CCGTTCGTCG
GAAAAGGTGT TCTGGCGCAA GGTGCTCGAC ATCTACGCCA CCAGCGTTGA CTACGACGCC
AGGGCCGAAG CCTCGCAACG CTTCTTTGCC ACGGTGCAGA ACAAGATGCA CTGGGCCACG
CATGGCCATA CAGCCGCCGA GTTGATTGCC TTGCGTGCCG ATGCCAGCAA GCCCCAGATG
GGGCTGCTGA CCTGGGCTGC AGCTCCGCAA GGTGGCGCCC CGCGCAAGGC CGACGCGAGC
GTGGCCAAGA ACTACCTGAC CGAAGACGAA TTGCAGGTGC TCAACCGCAT CGTCAATGCC
TATCTGGAGT TTGCGGAGCT GCAGGCGCTG GATCGCAAGC CCATGACCAT GGCGCAATGG
ATCACCAAGC TCGATGACTT TCTGCGCCTC TCGGGGCGAG AGATCTTGAC GCATGCGGGG
CGTATCACCG CCGAAGCGGC CCAGGGCAAG GCTGAAGCCG CGTTTGAGTT GTACCGTCAG
CAGCAGCGGG CTTTGCCAAG CCGTGCCGAG CAGGACTTTG AAGCCACTTT GCTCCAGCCA
GTCAAGGCCT TGGCAAAGCA GGTGCTGGAC AAGCCGAGCA AGCCCAGGCC CGTGAACAAA
ACCAAAAAGG GAGGCGTATG A
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| Protein sequence | MSRPPEPSVA PTGGEFVLFQ TQDAQTRVQV RLIDGVLWLT QRQMAELYQK DVRTVSEHLK
NVYTDGELNP DSTIRKFRIV AREGARDVER LVDHYNLDAV LQVGYRVRSP RGAQFRQWAT
ETLKSYLVKG FVLDDERFKR GADAEYFDEL LARIRDIRSS EKVFWRKVLD IYATSVDYDA
RAEASQRFFA TVQNKMHWAT HGHTAAELIA LRADASKPQM GLLTWAAAPQ GGAPRKADAS
VAKNYLTEDE LQVLNRIVNA YLEFAELQAL DRKPMTMAQW ITKLDDFLRL SGREILTHAG
RITAEAAQGK AEAAFELYRQ QQRALPSRAE QDFEATLLQP VKALAKQVLD KPSKPRPVNK
TKKGGV
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