Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_4070 |
Symbol | trkA |
ID | 6162156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4562267 |
End bp | 4563682 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641666848 |
Product | potassium transporter peripheral membrane component |
Protein accession | YP_001793087 |
Protein GI | 171060738 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0000101925 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACATCA TCATCCTGGG GGCCGGCCGC GTCGGGGAGA GCGTGGCCGA GAGCCTGGTC TCCGAGCGCA ACGACATCAC CGTGATCGAC ACCGATCCGG CCCGCCTGCG GCTGCTGCAG GACCGGCTCG ACCTGCGCGG CGTGACCGGC AACGGCATCC AGCCCTCGGT GCTCGAAACC GCCGGCGCGC GCGACGCCGA CATGCTGATC GCCTGCGCCC CGGCCGACGA GACCAACCTG GTGGCCTGCA AGGTGGCGCA CGAGCGCTTC GGCATCCAGA CCCGCATCGC CCGCATCCGC TCGCCCGAGT TCATGGCCGG CACCGACCTG CTCGGCACCG GCGGTTTCGC GGTCAACGAG GTGATCTGCC CGGAAGAATC GGTCACCCGC TACATCCGCA AGCTGATCGA ATACCCCGAG GCGCTGCAGG TGCTCGAGTT TGCCGACGGC GCGGCCAGCC TGATCGCGGT GCGTGCGGTC AGCGGCGGGC CGATGGTGCG CCACATCATC TCGGAGCTGC CGCAGCTGGT GCCGGGCGTG GCGATGCGCT TCGTGGCGAT CTACCGGCAG ACCGAAGACC ACGCCGACGA GCGCGTGGTG TGCGACGGCC GCACCCGCAT CGAGCCGGGC GACGAGGTCT TCGTGCTCGC CGCCACCCGC GACATCCGCC GCGTGCTCGA CGCGCTGCGC CGGCGCGACG AGCCGGTGCG CCGCGTCATG ATCGCCGGCG GCGGCCGGGT CGGGCTGCGG CTGGCACGCG AGATCGCCGA CGACTGCCGC ATCAAGCTGG TCGAGAGCGC CGCCGCGCGC TGCGAGTACC TCACCACCCA GGTCGCCGAC ACCGTGCTGG TGCTGCACGG CGACTCGACC GACGAGGACC TGCTCGAACG CGAGCAGATC GACGAGACCG ACCTGTTCGT CTCGCTCACC AGCGACGACG AGGACAACAT CATGGGCTGC CTGCTGGCCA AGCGCATGGG CGCCAAGCGG GTGCTGGCGC TGATCAACCG GCGTGCCTAT GCCGATCTGG TGCAGGGCAC GCAGATCGAC ATCGCGCTGT CGCCGGCGCA GACCGTGATC GGCGAACTGC TTGCGCACGT GCGCCGCGGC GACATCGAGG CGGTCTACAG CCTGCGCCGC GGCGCGGCCG AGGCGCTGGA GGCGGTGGCC CGCGGCGACC GCAAGACCTC GAAGGTGGTG GGCCGGCGCA TCGACGAGAT CCGGCTGCCC AAGGGCGCCG AGATCGGCGC GCTGGTGCGC GGCGAGCCCG GCGCGGACAA CGAGCGCGAG GTGATCATTC CGCACCACGA CACCGTGATC GAGCAGAACG ACCACGTCAT CGTCTTCCTG CCGCGCAAGC GCATGGTGCG CGAGATCGAG AAGCTCTTCC AGGTCAGTGC GACCTTCATG TTCTGA
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Protein sequence | MNIIILGAGR VGESVAESLV SERNDITVID TDPARLRLLQ DRLDLRGVTG NGIQPSVLET AGARDADMLI ACAPADETNL VACKVAHERF GIQTRIARIR SPEFMAGTDL LGTGGFAVNE VICPEESVTR YIRKLIEYPE ALQVLEFADG AASLIAVRAV SGGPMVRHII SELPQLVPGV AMRFVAIYRQ TEDHADERVV CDGRTRIEPG DEVFVLAATR DIRRVLDALR RRDEPVRRVM IAGGGRVGLR LAREIADDCR IKLVESAAAR CEYLTTQVAD TVLVLHGDST DEDLLEREQI DETDLFVSLT SDDEDNIMGC LLAKRMGAKR VLALINRRAY ADLVQGTQID IALSPAQTVI GELLAHVRRG DIEAVYSLRR GAAEALEAVA RGDRKTSKVV GRRIDEIRLP KGAEIGALVR GEPGADNERE VIIPHHDTVI EQNDHVIVFL PRKRMVREIE KLFQVSATFM F
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