| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4058 |
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| Symbol | |
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| ID | 6162891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4547278 |
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| End bp | 4547973 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641666836 |
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| Product | hypothetical protein |
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| Protein accession | YP_001793075 |
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| Protein GI | 171060726 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3913] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03373] type VI secretion-associated protein, BMA_A0400 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00000734924 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACGAAG CCCCCGGCTG GTACGGAAAA CTCGGCGCGC TGGGTGACTT CGCCTCGCGC
CGCCTGCCGC ACGCGCAGGT GCAGGCGCTC GACCACTGGC TGGCCAGCGT GATGTCGATC
AGCCAGTCCG AACTCGGCGG CGCCTGGCTC GACCACTACC TGCGCGCGCC GCTGTGGCGC
TACGCCTGGG CGCCCGGCGT GGTCGACAAC CAGTGGTGGT TCGGCGTGCT GATGCCCAGC
TGCGACAGCG TCGGCCGCTA CTTCCCGCTG CTGCTGGCGC AGCCGCGCGC GCAGGCGCCG
CAGGACCGGC TGGCGCTCAA CCACCTCGAA CTCTGGTGGC GCCACCTGGC CGAGGCCGCG
CTCGCCACGC TGGCCGAACG CGCCACGCTC GACGAGTTCG AGCAGGCGCT GGCCGAAGCA
CCGCCCTGGC CCACGCCGGC CAGCGCCAAC CCGCCGCTGG CCCGCAGCAG CCGCAACCGC
ATCACCGGCC GCCCCTGCGA GGAGCAACCG CTCGGCCCGC GCACCGACCT GGCCGACTGG
CTCGGCCACC GCGCCGCGCA GGCGCTGCTG CAGCAGCTCG GCGGCCACAG CCTGTGGTGG
CCGTTCGAGC TGGGCCGCAG CACCCCGCCG ATCCGCCTGC TGCAGGGCCT GCCGGACGGC
GCCGAATTCG GCGCCCTGCT CGGCCACGCC GATTGA
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| Protein sequence | MHEAPGWYGK LGALGDFASR RLPHAQVQAL DHWLASVMSI SQSELGGAWL DHYLRAPLWR
YAWAPGVVDN QWWFGVLMPS CDSVGRYFPL LLAQPRAQAP QDRLALNHLE LWWRHLAEAA
LATLAERATL DEFEQALAEA PPWPTPASAN PPLARSSRNR ITGRPCEEQP LGPRTDLADW
LGHRAAQALL QQLGGHSLWW PFELGRSTPP IRLLQGLPDG AEFGALLGHA D
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