| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3975 |
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| Symbol | |
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| ID | 6161962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4461513 |
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| End bp | 4462388 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666753 |
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| Product | aldose 1-epimerase |
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| Protein accession | YP_001792994 |
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| Protein GI | 171060645 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00305422 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGAAA CCTCTCCCCA ACCGCGCGCC CACCAGCGCA CCGGTCCGTG CCAGTTCGAA
GGCCAGAGCG CCGTGCACCT GCGCTCGCCC GCCGGCGCCC AGGCCACCGT GCTGCTGCAT
GGCGCCACCC TGGTGTCGTG GCAGCCGGCT GGCGACGAAG AACAGCTCTA CCTGTCGCCG
GCGGCCGTGC TCGACGGCAG CGCGCCCGTG CGCGGTGGCG TGCCGGTGAT CTTTCCGCAG
TTCAACCAGC AGGGGCCGCT GCCCAAGCAC GGCTTTGCAC GCGACCACGC CTGGACGCTG
CAGGAGGCGA CGGTGCGCGG CGAACACGCC TTCGCGGTGC TCACGCTCAG CGACAACGAG
GCCACCCGCG CGCTCTGGCC GCACGCCTTC ACGCTTGAGC TGACGATCAG CATCGACAGC
CACCGCATCG ACATGGAGCT GGCGGTGATC AACAACGGCG AGATGCCGTT CGAGTTCCAG
GCCGCGCTGC ACACCTACCT GTCCACCACC GACGTGCGAC GCGCCCAGCT CGAAGGCCTG
ATCGGCCAGA ACTACCAGGA CACCGTGCTC GACCAGCCGC GCCAGCAGTG GATCGACGTC
GTCACGATCG CCCAGGAAAT CGACCGCATC TACTGGCAGG CGCCGGCCGA GCTGACGCTG
CGCGACACGG GCCGCCGGCT GGCGATCGTC AGCCGCGGCT TCGAGGACTG CGTGGTCTGG
AACCCCGGCC CCGAGCGCTC GGCCAGCCTT CCCGACCTGC CGGACGACGG CTGGCTGACG
ATGCTGTGCG TCGAGGCCGC GCAGATCGGC AACCCGGTGC GGCTCGCCGC CGGCGAGGAA
TGGTCGGCAA TCCAGAGCCT GGTCGTCGCC AAATAA
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| Protein sequence | MTETSPQPRA HQRTGPCQFE GQSAVHLRSP AGAQATVLLH GATLVSWQPA GDEEQLYLSP
AAVLDGSAPV RGGVPVIFPQ FNQQGPLPKH GFARDHAWTL QEATVRGEHA FAVLTLSDNE
ATRALWPHAF TLELTISIDS HRIDMELAVI NNGEMPFEFQ AALHTYLSTT DVRRAQLEGL
IGQNYQDTVL DQPRQQWIDV VTIAQEIDRI YWQAPAELTL RDTGRRLAIV SRGFEDCVVW
NPGPERSASL PDLPDDGWLT MLCVEAAQIG NPVRLAAGEE WSAIQSLVVA K
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