| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3954 |
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| Symbol | ruvB |
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| ID | 6162570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4433720 |
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| End bp | 4434811 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666732 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_001792973 |
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| Protein GI | 171060624 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0150024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCC AGACCGATTC GTTTGCCGCC GCGCCGGCGC CCTCATCCGG CAGCACCCGC
CGCCTCATCA GCGCCGCACC CACCTCGCCG AATGAAGAAG CGATGGAGCG CGCCCTGCGC
CCCAAGCTGC TGCAGGAGTA CGTCGGCCAG GCCAAGGCGC GCGAGCAGCT CGAGATCTTC
ATCGGCGCGG CCCGCAAGCG CAGCGAGGCA CTCGACCACG TGCTGCTGTT CGGCCCGCCC
GGCCTGGGCA AGACCACGCT GAGCCACATC ATCGCCGCCG AACTGGGCGT GAACCTGCGC
CAGACCAGCG GCCCGGTGCT CGAAAAACCC AAGGACCTGG CCGCGATCCT GACCAATCTC
GAAGCCAACG ACGTCCTGTT CATCGACGAG ATCCACCGCC TCTCGCCGGT GGTCGAGGAG
ATCCTCTACC CGGCGCTGGA GGACTACCAG ATCGACATCA TGATCGGCGA AGGCCCGGCG
GCGCGCAGCA TCAAGCTCGA CCTGCAACCC TTCACGCTGG TGGGCGCCAC CACCCGCGCG
GGCATGCTGA CCAATCCGCT GCGCGACCGC TTCGGCATCG TCGCGCGGCT GGAGTTCTAC
ACGCCCGAGG AGCTGGTGCG CATCGTCACC CGCTCGGCCG GGCTGCTCAA CGTGCCGATC
GACGCCGAAG GCGCGCTCGA ACTGGCCTGC CGTTCACGCG GCACGCCGCG CATCGCCAAC
CGGCTGCTGC GGCGGGTGCG CGACTACGCC GAGGTCAAGA GCGACGGCCG CATCGTCAAG
CGCATCGCCG AGCTGGCGCT GACCATGCTC GACGTCGACC CGCGCGGTTT CGACGTGATG
GACCGCAAGC TGCTCGAGGC GGTGATCCAC CGCTTCGACG GCGGCCCGGT CGGGCTCGAC
AACGTGGCCG CGGCGATCGG CGAGGACGCC GGCACGATCG AGGACGTGAT CGAGCCGTAC
CTGATCCAGC AGGGTTTCCT GCAGCGCACG CCGCGCGGGC GCATCGCCAC GCTGGCGGCG
TATCGGCACC TGGGCGTGAC GCCACCGCGC GGTGGCGCCG GCCCGGTCGG CAGCGACCTG
TTCGAGGGCT GA
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| Protein sequence | MAIQTDSFAA APAPSSGSTR RLISAAPTSP NEEAMERALR PKLLQEYVGQ AKAREQLEIF
IGAARKRSEA LDHVLLFGPP GLGKTTLSHI IAAELGVNLR QTSGPVLEKP KDLAAILTNL
EANDVLFIDE IHRLSPVVEE ILYPALEDYQ IDIMIGEGPA ARSIKLDLQP FTLVGATTRA
GMLTNPLRDR FGIVARLEFY TPEELVRIVT RSAGLLNVPI DAEGALELAC RSRGTPRIAN
RLLRRVRDYA EVKSDGRIVK RIAELALTML DVDPRGFDVM DRKLLEAVIH RFDGGPVGLD
NVAAAIGEDA GTIEDVIEPY LIQQGFLQRT PRGRIATLAA YRHLGVTPPR GGAGPVGSDL
FEG
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