Gene Lcho_3953 details

Gene Information

• Locus tag: Lcho_3953
• Symbol: ruvA
• ID: 6162569
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 4433060
• End bp: 4433635
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 641666731
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_001792972
• Protein GI: 171060623
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 28
• Fosmid unclonability p-value: 0.0761943
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCGGAC GTCTCACCGG CACCCTGGCC GAAAAATCCC CGCCCCAGCT GCTCGTCGAC 
GTGGGCGGCG TCGGCTATGA AGTCGACGTG CCGATGAGCA CCTTCTACAA CCTGCCGGTG 
CTGGGCGAAC GCGTCACGCT GCTGACTCAC TTCGTGGTGC GCGAGGACGC CCAGCTGCTC 
TACGGCTTCC TGACCGCCAC CGAACGCGCC ACCTTCCGCC AGCTGCTCAA GATCAGCGGC 
GTGGGCGCAC GCACCGCCTT GTCGATCCTG TCGGGCCTGA GCGTGGCCGA CCTGGCGCAG 
GCGGTCAGCG CCCAGGAGGC CGGCCGGCTG GTCAAGGTGC CCGGCATCGG CAAGAAGACC 
GCCGAGCGCC TGCTGCTCGA ACTCAAGGGC AAGCTCGGCC CCGACCTGGC GCTGCCCGGC 
GCGGTGATCC GCAACGAGGC GCAATCCGAC ATCGTGCAGG CGCTGATCGC GCTGGGATAC 
AACGAGCGCG AAGCCGCCGC CGCCATCAAG CCGCTGCCGG CGGACGTGGG CGTGAGCGAC 
GGCATCAAGC TCGCCTTGCG CGCCCTCGGC AAGTGA 

 

Protein sequence

MIGRLTGTLA EKSPPQLLVD VGGVGYEVDV PMSTFYNLPV LGERVTLLTH FVVREDAQLL 
YGFLTATERA TFRQLLKISG VGARTALSIL SGLSVADLAQ AVSAQEAGRL VKVPGIGKKT 
AERLLLELKG KLGPDLALPG AVIRNEAQSD IVQALIALGY NEREAAAAIK PLPADVGVSD 
GIKLALRALG K