| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3938 |
|---|
| Symbol | rplX |
|---|
| ID | 6163583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 4416038 |
|---|
| End bp | 4416355 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641666716 |
|---|
| Product | 50S ribosomal protein L24 |
|---|
| Protein accession | YP_001792957 |
|---|
| Protein GI | 171060608 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0198] Ribosomal protein L24 |
|---|
| TIGRFAM ID | [TIGR01079] ribosomal protein L24, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA TTCTCAAAGG CGACGAAGTC ATCGTGTTGA CGGGTCGCGA CAAGGGTAAG
CGCGGCAAGA TCGCCGTGCG CGTGGATGAA GATCATGTGC TGGTTGATGG CGTGAACGTC
GTCAAGAAGC ATGTGCGTCC GAACCCGCTC AAGGGCACGA CCGGTGGCAT CGTCGACAAG
ACCATGCCGA TTCATCAATC GAATGTGGCG ATCTACAACC CCGCGTCCGG CAAGGCCGAC
CGTGTGGGGA TCAAGCTGCT GGCTGACGGC AAGAAAGTGC GCGTCTTCAA GTCCAGTGGC
GAAGAGATCA AGGCCTGA
|
|---|
| Protein sequence | MNKILKGDEV IVLTGRDKGK RGKIAVRVDE DHVLVDGVNV VKKHVRPNPL KGTTGGIVDK
TMPIHQSNVA IYNPASGKAD RVGIKLLADG KKVRVFKSSG EEIKA
|
|---|
| |