Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3912 |
Symbol | |
ID | 6161785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4396310 |
End bp | 4397704 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641666690 |
Product | SurA domain-containing protein |
Protein accession | YP_001792931 |
Protein GI | 171060582 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAC GCCTGCCCTG GCTCAGCCGA TTGAAACCCG CCGAACGCAT CCGCTTCGTC ACCGCCTGCG GTGCCGCCCT GAGCCGGCAG CTGATCCGGC ACTCGCCGCT GGTCGTGAGC CTGCTGATGC TGGGCCTGGC GCCGGCGTCC GGCAGCGCCC AGGAGGGCTC GCGCCAGAAC GCCGACTACA TCGTCGCGGT GGTGAACCGG GAACTGGTCA CCAACAGCGA AGTGCAGCAG CGTGTCGAGC GCCTCGAACA GGAAGCCGCA CGCGCCAATG CGCAGGTGCC CTCGCGTGAC GCGCTGCAAC GCGACGTGCT CGACCAGCTG ATCGACGAGC GTGCGCAGCT CGGCGTGGCA CGCGAGAGCG GCCTGCGCAT CGACGACGCC GAACTCGACC GCACGGTCGC CAGCGTGGCG GCGCAGAACC AGCTGACGGT GGCCGAGATG CGCGAGCGGC TGCGCGCCGA CGGCCTCGAC TACCCGCGCT TTCGCGACAA CCTGCGCGAC CGCCTGCTGC TCGAGCGCCT GCGCGAACGC GAGGTGCAGG CGCGCCTGCG CATCGTCGAC GCCGACATCG AGAACTGGCT CGTCCAGCAG CGCGAGAAAT CGGGCGCGTC CAACGAGTTC AACATCGCCC AGATCCTGAT CGCGGTGCCC GAGAACGCCA ATGTCGCCGA CACCGCGGCG CGGCGCGCGG TGGCGGTGAA CGTGCTGCAG CGCCTGCGTG CCGGCGAAGA CTTCGGCAAG CTCGTGCTGG AACTGTCCGA CGCCTCGAAG GCCAACGGCG GCGAACTCGG CCTGCGCCGT GGCGACGCCC TGCCCGACCT GTTCGTCGAG GCGGTGCAGC CGCTGCTGGC GGGCGAGGTC GCGCCGCAGG TGGTGCGCTC GGGGGCCGGC TTCCACGTGC TCAAGCTGAT CGAACGCAAG GACGCCACGC TGTCGATCCC GCAGACCCGC GCCCGCCACA TCCTGCTGCG TCCGGGCCCC GGCCTGAGCC AGGAAACCGT GATCGCCCGG CTGGCCGAAT TCCGCCAGCG GATCCTGGGC GGCCGGGCCC GGTTCGAAGA GCTGGCGCGG CAGTTTTCCG AGGACGGCAG CGCCGCCGGC GGCGGCGATC TGGGCTGGGC GGCGCCCGGC CAGTTCGTGC CCGAGTTCGA GCAGGCGATG CAGGACCTGC AGCCCGGCGG CCTGTCGGCG CCGGTGGTGT CGCGCTTCGG CGTGCACCTG ATCCAGCTGA TCGAGCGCCG CCAGGTCAGC CTGGACGTGC GCCAGCAGCG CGAAGTGGCA CGCAACGCCC TGCGCGAGCA GAAGTACGAA GAAACCTACC TCGAATGGTC ACGTGACGTG CGCGCCCGCG CCTACGTCGA ACTGCGTGAA CCACCCGGGC TCTGA
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Protein sequence | MTARLPWLSR LKPAERIRFV TACGAALSRQ LIRHSPLVVS LLMLGLAPAS GSAQEGSRQN ADYIVAVVNR ELVTNSEVQQ RVERLEQEAA RANAQVPSRD ALQRDVLDQL IDERAQLGVA RESGLRIDDA ELDRTVASVA AQNQLTVAEM RERLRADGLD YPRFRDNLRD RLLLERLRER EVQARLRIVD ADIENWLVQQ REKSGASNEF NIAQILIAVP ENANVADTAA RRAVAVNVLQ RLRAGEDFGK LVLELSDASK ANGGELGLRR GDALPDLFVE AVQPLLAGEV APQVVRSGAG FHVLKLIERK DATLSIPQTR ARHILLRPGP GLSQETVIAR LAEFRQRILG GRARFEELAR QFSEDGSAAG GGDLGWAAPG QFVPEFEQAM QDLQPGGLSA PVVSRFGVHL IQLIERRQVS LDVRQQREVA RNALREQKYE ETYLEWSRDV RARAYVELRE PPGL
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