Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3896 |
Symbol | |
ID | 6162055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 4376123 |
End bp | 4377610 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641666674 |
Product | 4-alpha-glucanotransferase |
Protein accession | YP_001792915 |
Protein GI | 171060566 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1640] 4-alpha-glucanotransferase |
TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.979798 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTGC CCCGAGCCAG CGGCGTCCTG CTGCATCCCA CGTCCTTGCC GGGGCCGCAC GGCTCTGGCG ACTTCGGGCC GTCGGCCTAT CACTTCGTCG ACTGGCTGGC AGTGGCCGGG CAGAAGCTCT GGCAGTTCCT GCCGCTGGGC GGGCTCGGGC CGGGCAACTC GCCGTACATG AGCACCTCGG CGTTCGCCGG CAACGTGCTG CTGATCGACC TGACCGAGCT GCGCCAGCAC GGCTGGCTCG ACGACGCCGA CCTGCAACCG GCCGACGGCC TGTGGGCGCA CGCGGTGAAC TTCCCCGCCG TGGCGCCGTT CCGCATGGAG CGGCTGGCGC GCGCGGCGCG GCGTTTCGAC GCGCAGGGCA GCGAATCCGA CTGGGCCGGC TTCAGCCGCT TCTGCGCCGA ACATGCCTCG TGGCTCGACG ACTACGCGCT GTTCATGACC CTCGACGAGC TGCATCACGG CGCCTTCTGG TGCGACTGGC CGCAGCCGCT CGCCAGGCGC GAGCCGGCGG CGCTGGCGCA GATCGCCGCG CAGCACGCCG AGCGCATCCA GTTCTGGAAG TTCTGCCAGT GGTGCTTCTT CCGCCAGTGG GCGCACCTGC GCACCTACGC GCACGAACGC GGCGTGCAGA TGGTCGGCGA CATCCCGATC TTCATCGCCC AGCAGAGCGC CGACGTGTGG GCGCGGCCCG AGCTGTTCGA GCTCGATGAC CACGGCCGGC TGCTCGCGGT GGCCGGTGCG CCGCCCGATT CGTTCAGCGC CACCGGCCAG CACTGGGGCA ACCCGCTGTA CCGCTGGCAG GCCCATGCGG ACGAGGGTTA CGCGTGGTGG ACCGAGCGCA TCCGCCGCAC CTTCGAGCTG GTCGACATCG TGCGCATCGA CCACTTCCGC GGCTTCGTGG CGTACTGGTC GATCCCGGCC ACCGACACCC ATGCGATGAA CGGCCACTGG GAGCCGGGGC CGGGCGCGGC GCTGTTCGAG GCGGTGACCG CGGCGCTGGG CGAGCTGCGC ATCATTGCCG AGGACCTGGG CGTCATCACG CCCGAGGTCG ACGCGCTGCG CCGTGACTTC GCCTTGCCCG GCATGCGCAT CCTGCAGTTC GCCTTCGGCG AGGGCAACGC GCACGCCTAC CTGCCGCACA ACCACGAGCA CGACACCGCC GTCTACACCG GCACGCACGA CAACGACACC ACGCCCGGCT GGTGGCACAC GCTGCCCGAA CACGTGCGCC ACCACGTGCG CGAATACCTC GCCATCGACG GCCGCGACAT CCACTGGGAC CTGATCCGCG CCGCCTGCGC CAGCGTCGCC GACACGGTGA TCGTGCCGAT GCAGGACGTG CTGGGCCTGC CCACCGAACA CCGCATGAAC TACCCCGGCA AGGCCGAGGG CAACTGGTCG TGGCGCTTTG GCTGGGGTGA TGTCGGGCCG CTGCCCGCGC AGCGGCTGCG CGCGCTGTGC ACGCTGTACC GGCGCTGA
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Protein sequence | MRLPRASGVL LHPTSLPGPH GSGDFGPSAY HFVDWLAVAG QKLWQFLPLG GLGPGNSPYM STSAFAGNVL LIDLTELRQH GWLDDADLQP ADGLWAHAVN FPAVAPFRME RLARAARRFD AQGSESDWAG FSRFCAEHAS WLDDYALFMT LDELHHGAFW CDWPQPLARR EPAALAQIAA QHAERIQFWK FCQWCFFRQW AHLRTYAHER GVQMVGDIPI FIAQQSADVW ARPELFELDD HGRLLAVAGA PPDSFSATGQ HWGNPLYRWQ AHADEGYAWW TERIRRTFEL VDIVRIDHFR GFVAYWSIPA TDTHAMNGHW EPGPGAALFE AVTAALGELR IIAEDLGVIT PEVDALRRDF ALPGMRILQF AFGEGNAHAY LPHNHEHDTA VYTGTHDNDT TPGWWHTLPE HVRHHVREYL AIDGRDIHWD LIRAACASVA DTVIVPMQDV LGLPTEHRMN YPGKAEGNWS WRFGWGDVGP LPAQRLRALC TLYRR
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