Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3878 |
Symbol | |
ID | 6163448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 4351105 |
End bp | 4351671 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641666656 |
Product | glutamine amidotransferase of anthranilate synthase |
Protein accession | YP_001792897 |
Protein GI | 171060548 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0512] Anthranilate/para-aminobenzoate synthases component II |
TIGRFAM ID | [TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTGA TGATCGACAA CTACGACTCC TTCACGTTCA ACCTCGTGCA GTACTTTGCC GAGTTGGGCG AGGACGTGCG GGTGCACCGC AACGACGAGA TCTCGATCGC CGAGATCGAG GCCCTCAAGC CCGACCGCCT GGTGCTGTCG CCGGGGCCGT GTTCGCCGGC CGAGGCGGGC ATCTGCATCG AGAGCATCCG TCACTTTGCC GGCAAGCTGC CGATCCTGGG CGTGTGCCTG GGGCACCAGA GCATCGGCGC GGCGCTGGGT GGCCACATCG TGCGGGCGCA GACCCAGATG CACGGCAAGG CCGACACCAT CACGACCGAC CAGCAGGGCG TGTTCGCCGG GCTGCCGCGG CAGTTCAGCG TGGTGCGCTA CCACTCGCTG GCGATCGAGC GCGAGAGCCT GCCGGCCGAG CTGGTGGTCA CCGCCACCAG CGAGGACGGC GAGATCATGG GCGTGCGCCA CAGGACGCTG GCGATCGAGG GCGTGCAGTT CCACCCCGAA TCGATCCTCA GCGAACACGG CCACGCGATG CTGAAGAACT TCCTGCAGAC GCGCTGA
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Protein sequence | MLLMIDNYDS FTFNLVQYFA ELGEDVRVHR NDEISIAEIE ALKPDRLVLS PGPCSPAEAG ICIESIRHFA GKLPILGVCL GHQSIGAALG GHIVRAQTQM HGKADTITTD QQGVFAGLPR QFSVVRYHSL AIERESLPAE LVVTATSEDG EIMGVRHRTL AIEGVQFHPE SILSEHGHAM LKNFLQTR
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