Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3876 |
Symbol | |
ID | 6163446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 4349225 |
End bp | 4350013 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641666654 |
Product | indole-3-glycerol-phosphate synthase |
Protein accession | YP_001792895 |
Protein GI | 171060546 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACA TCCTGAACAA GATCGTCGCG ACCAAACACG AGGAAATCGC CGCGGCGCGT GCGCATCGTG GCCTGGTCTC GTTGCGCGAC GAAGCCGAAG CCCGCACCGA CGTGCGCGGC TTCGAGGCGG CCATGCGCGC CAAGATTGCG GCGGGCCAGG CGGCGGTGAT CGCCGAGGTC AAGAAGGCCA GCCCGAGCAA GGGCGTGCTG CGCGAGGATT TCCGCCCGGC CGAGATCGCC GCGAGCTACG AGCGCCACGG CGCCGCCTGC CTGAGCGTGC TGACCGACGC GCTCTATTTC CAGGGCTGCG CCGACTACCT GCGTCAGGCC CGCGCGGCCT GCGCGCTACC GGTGCTGCGC AAGGATTTCA TGGTCGACGA GTACCAGGTG CACGAGGCCC GCGCGATGGG CGCCGACGCC ATCCTGCTGA TCGCGGCCTG CCTCGACGAC GCGCAGATGG CCGATCTGGA GGCGGTGGCG CTGGCGCACC GCATGAGCGT GCTGGTCGAG GTGCACGATC GTGACGAACT GCAACGTGCG CTGCGCCTGA AGACGCCACT GCTGGGTATC AACAACCGCA ATCTGCGCAC CTTCGAGGTC ACGCTCGACA CGACGCTGGG CATGCTCGGA GAGGTGCCGT CGGATCGCCT GCTGGTCACC GAATCGGGCA TCCTGGGGCG TGACGACGTG CAGCGCATGC GCGCGGCCCA GGTGCATGCC TTCCTGGTCG GCGAGGCCTT CATGCGCGCG TCGGATCCGG GCGTGGCGCT GGCCGCGCTG TTTGCCTGA
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Protein sequence | MSDILNKIVA TKHEEIAAAR AHRGLVSLRD EAEARTDVRG FEAAMRAKIA AGQAAVIAEV KKASPSKGVL REDFRPAEIA ASYERHGAAC LSVLTDALYF QGCADYLRQA RAACALPVLR KDFMVDEYQV HEARAMGADA ILLIAACLDD AQMADLEAVA LAHRMSVLVE VHDRDELQRA LRLKTPLLGI NNRNLRTFEV TLDTTLGMLG EVPSDRLLVT ESGILGRDDV QRMRAAQVHA FLVGEAFMRA SDPGVALAAL FA
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