| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3870 |
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| Symbol | |
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| ID | 6162490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4344259 |
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| End bp | 4344972 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641666644 |
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| Product | ribosomal protein L1 |
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| Protein accession | YP_001792889 |
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| Protein GI | 171060540 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGC TGACGAAACG CCAAAAAGCC CAAGTGGGCA AGATCGAAAC CACCAAGCTG
TACGCGGTGG ATGACGCGAT CGCGCTGATC AAGGAATTCG CCGTCGCCAA GTTCGACGAG
TCGATCGACG TGGCCGTCCA GCTCGGCGTC GACGCCAAGA AGTCGGACCA GGTGGTGCGT
GGCGCCGTCG TGATGCCCAA CGGCACCGGC AAGACCAAGC GCGTGGCCGT GTTCACCCAG
GGTGCCAAGG CTGATGAAGC CCGTGCCGCT GGCGCCGACA TCGTCGGCAT GGACGACCTG
GCTGCTGAAG TCAAGGCCGG CAACATCAAC TTCGACGTGG TCATCGCCTC GCCGGACGCG
ATGCGCGTGG TCGGTCAGCT GGGCCAGATC CTCGGCCCGC GCGGCCTGAT GCCGAACCCG
AAGGTCGGTA CCGTGACCGC CGACGTCGCC ACCGCCGTGC GCAATGCCAA GGCCGGTCAG
GTGCAGTTCC GCGTCGACAA GGGCGGCATC ATCCACGGCA CGATCGGTCG TCGTTCGTTC
GACACCGACA AGCTCAAGGG CAACCTGCAG GCTCTGCTGG ACGCGCTGAA CAAGGCTAAG
CCGGCTTCGA GCAAGGGCGT CTACCTGCGC AAGGTCGCGG TGTCGTCGAC CATGGGCGTG
GGCGTTCGGG TCGAAGTCGC CAGCATCACT GCGGGTCTGG CTGCCCAGTC CTGA
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| Protein sequence | MAKLTKRQKA QVGKIETTKL YAVDDAIALI KEFAVAKFDE SIDVAVQLGV DAKKSDQVVR
GAVVMPNGTG KTKRVAVFTQ GAKADEARAA GADIVGMDDL AAEVKAGNIN FDVVIASPDA
MRVVGQLGQI LGPRGLMPNP KVGTVTADVA TAVRNAKAGQ VQFRVDKGGI IHGTIGRRSF
DTDKLKGNLQ ALLDALNKAK PASSKGVYLR KVAVSSTMGV GVRVEVASIT AGLAAQS
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