Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3862 |
Symbol | |
ID | 6161175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4329358 |
End bp | 4329828 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641666635 |
Product | 30S ribosomal protein S7 |
Protein accession | YP_001792881 |
Protein GI | 171060532 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0049] Ribosomal protein S7 |
TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACGTC GTCGCGAAGT CCCCAAACGG GAGATCCTGC CTGATCCGAA ATTCGGTTCG GTCGATCTGT CCAAGTTCAT GAACGTCATC ATGGAATCGG GCAAGAAGGC TGTTGCCGAG CGCATCATCT ACGGCGCCCT CGAGCAGGTC GAGAAGAAGG CCGGCAAGGA TCCGATGGAA ATCTTCCTGA CCGCGCTGAA CAACGTCAAG CCGATGGTCG AAGTGAAGTC ACGCCGCGTC GGTGGTGCGA ACTACCAAGT TCCCGTGGAA GTTCGCCCCA TCCGCCGGAT GGCTCTGGCC ATGCGCTGGC TGAAGGAATC GGCCCGCAAG CGCAGCGAGA AGTCCATGGC CCAGCGCCTG GCCAACGAGC TGATGGAAGC CTGCGAAGGC CGTGGCGGCG CGATGAAGAA GCGCGACGAA GTGCACCGCA TGGCTGAAGC CAACAAGGCG TTCTCGCACT TCCGTTTCTG A
|
Protein sequence | MPRRREVPKR EILPDPKFGS VDLSKFMNVI MESGKKAVAE RIIYGALEQV EKKAGKDPME IFLTALNNVK PMVEVKSRRV GGANYQVPVE VRPIRRMALA MRWLKESARK RSEKSMAQRL ANELMEACEG RGGAMKKRDE VHRMAEANKA FSHFRF
|
| |