| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3847 |
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| Symbol | |
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| ID | 6162622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4313157 |
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| End bp | 4314854 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666620 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001792866 |
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| Protein GI | 171060517 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2509] Uncharacterized FAD-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCGAA TCACCGAACT GCGCCTGCCG CTGAACCACG CCGATGAGGC GCTGCGCGCC
GCGATCGTGG CGCGCCTGGG CCTGCAGCGC GATGCGGACC TGGCGGCGTT CACGGTCTTC
AAGCGCGCCT ACGACGCCCG CAAGAAGACC GCGGTGGTGC TGATCTACAC GGTCGACTGC
ACGCTGGCGG ACGGCGTCGA CGAGGCCGCG CTGCTGGCCC GCGCCGCCGG CGCGGCGGGT
GGAGACCAGC ACCTCAAGCC CAGCCCCGAC ACCTCGTACC GGTTCGTCGG CCACGCGCCG
GCGGATTTCT ACGCCTCGGG CGAACGGCTG CGCCCGCTGG TGATCGGCTT CGGGCCGTGC
GGGCTGTTCG CCGCGCTGAT CCTGGCGCAG ATGGGCCTCA AACCCATCGT GCTGGAGCGC
GGCAAGGTGG TGCGCGAGCG CACCAAGGAC ACCTGGGGCC TGTGGCGCCA GGGCGTGCTG
ACACCGGAGT CGAACGTGCA GTTCGGCGAG GGCGGCGCCG GGACGTTTTC CGACGGCAAG
CTCTGGAGCC AGATCAGCGA TCCGCGCCAC CTGACGCGCA AGGTGCTGAC CGAGTTCGTC
AAGGCCGGTG CGCCCGACGA GATCCTCTAC GTCAGCAAGC CGCACATCGG CACCTTCCGG
CTGGTGTCGA TGATCGAGAA GATGCGCGCC GACATCGAGG CGCTGGGCGG CGAGATCCGC
TTCCAGCAGC GCGTGACGGA CGTGCTGATC GAACAAGGTC ATATCAGAGG CGTGACGCTG
GCCAGCGGCG AGCAGCTCCG CGCCGACCAC GTCGTGCTGG CGCTCGGCCA CAGCGCGCGC
GACACCTTCA CGATGCTGCA CGAGCGCGGT GTGCAGATGG AGGCCAAGCC GTTCTCGATC
GGCTACCGCA TCGAGCACCC GCAGAGCGTG ATCGACCGCG CGCGTTTCGG CCCCAACGCC
GGCAACCCGA TCCTCGGCGC GGCCGACTAC AAGCTGGTGC ACCACGCCAG CAACGGCCGC
GCGGTCTACA GCTTCTGCAT GTGCCCGGGC GGCACGGTGG TGGCCGCCAC GTCGGAGCCC
GATCGTGTCG TCACCAACGG CATGAGCCAG TACTCGCGCA ACGAGCGCAA CGCCAACGCC
GGCATCGTGG TCGGCATCGA CCCGCAGGAC TACCGGCAGG ACGGCCGCAG CGAAGGCCCG
GTCAGCCCGC TCGACGGCAT GGCGTTCCAG CGGCTGTGGG AATCGCGTGC CTACGAACTC
GGCGGCGGCG GCTACGTCGC GCCGGGCCAG CTGGTCGGCG ACTTCATCAA GAACCAGCGC
GGCCCGCGCA GCGGCCAGGC CTTCGGCAGC GTGCTGCCGT CGTACAAGCC CGGCGTGCAT
CTGACAGACC TGTCCGAGCC CGGCCGCGGC AGCCTGCCCG ACTACGCGCT GGCCGCGATC
CGCGAGGCGC TGCCGGCCTT CGAGCGCCAG ATCAAGGGTT TCTCGATGGC CGACGCGGTG
CTGACCGGCG TGGAGACGCG CACCTCGTCA CCGCTGCGCA TCAACCGCGG CCGCGACCAC
CAGAGCCTGA ACGTGCGCGG TCTGTACCCG GCCGGCGAAG GCGCGGGGTA TGCGGGCGGC
ATCATGTCGG CCGGTGTCGA CGGCATCGAG GTGGCCGAGT CGCTGGCCCG CCAGATGCTG
GGCCAGCGCG CCGGCTGA
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| Protein sequence | MLRITELRLP LNHADEALRA AIVARLGLQR DADLAAFTVF KRAYDARKKT AVVLIYTVDC
TLADGVDEAA LLARAAGAAG GDQHLKPSPD TSYRFVGHAP ADFYASGERL RPLVIGFGPC
GLFAALILAQ MGLKPIVLER GKVVRERTKD TWGLWRQGVL TPESNVQFGE GGAGTFSDGK
LWSQISDPRH LTRKVLTEFV KAGAPDEILY VSKPHIGTFR LVSMIEKMRA DIEALGGEIR
FQQRVTDVLI EQGHIRGVTL ASGEQLRADH VVLALGHSAR DTFTMLHERG VQMEAKPFSI
GYRIEHPQSV IDRARFGPNA GNPILGAADY KLVHHASNGR AVYSFCMCPG GTVVAATSEP
DRVVTNGMSQ YSRNERNANA GIVVGIDPQD YRQDGRSEGP VSPLDGMAFQ RLWESRAYEL
GGGGYVAPGQ LVGDFIKNQR GPRSGQAFGS VLPSYKPGVH LTDLSEPGRG SLPDYALAAI
REALPAFERQ IKGFSMADAV LTGVETRTSS PLRINRGRDH QSLNVRGLYP AGEGAGYAGG
IMSAGVDGIE VAESLARQML GQRAG
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