| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3843 |
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| Symbol | |
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| ID | 6161958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4306699 |
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| End bp | 4307952 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641666616 |
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| Product | NO3-/NO2-ABC transporter |
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| Protein accession | YP_001792862 |
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| Protein GI | 171060513 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGC CCCAAGACCC GGTGACGCCC GTGAACCTGC CGCGACGCGA TTTTCTTCAA
CGTGCTGCCG CCGTGTCCGG CGCGCTGGCC GTGCCCGGCG GCGCGTGGGC GGCCGGCTCC
GATGCGCCCG AGAAGAAGGA GGTGCGCATC GGCTTCATCC CGCTGACCGA CTGCGCCTCG
GTGGTGATGG CCTCGGTGCT GAAGTTCGAC GAGAAGTACG GCATCAAGAT CATCGCGAGC
AAGGAAGCTT CCTGGGCCGC CGTGCGCGAC AAGCTGGTCA ACGGCGAGCT CGACGCCGCG
CACGTGCTCT ACGGCCTGGT CTACGGCGTG CATCTGGGCA TCAGCGGCCC CAAGAAGGAC
ATGGCCGTGC TGATGACGCT CAACAACAAC GGCCAGGCGA TCACGCTGTC GAAGAAGCTG
GCCGACAAGG GTGCGGTCGA CGGCGCCGGG CTGGCCAAGC TGATGAAGGC CGAGCCGCGC
GAATACACCT TCGCGCAGAC CTTCCCGACC GGCACCCACG CGATGTGGCT GTACTACTGG
ATGGCGGCCA ACGGCATCAA CCCGATGACC GACGCCAAGG TCATCGTGGT GCCGCCGCCG
CAGATGGTGG CCAACATGCG CGTGGGCAAC ATGGACGGCT TCTGCGTCGG CGAGCCCTGG
AACCACCGCG CCATCATGGA CGGCATCGGC GTGACCGCGG TCACCACGCA GGACATCTGG
CGCGACCACC CCGAAAAGGT GCTGGGCGCG ACCAACGACT TCGTCACCAA GAACCCGAAC
ACCGCCCGCG CGATGGTGAT GGCCATCCTC GAGGCCAGCC GCTGGATCGA CACCGGCCTG
CAGAACAAGA TGAAGATGGC CGAGACGGTG GCCGAGAAGT CGTACATCAA CACCTCGGTC
GACGCCATCA ACCAGCGCAT CCTGGGCCGC TACCAGAACG GCATGGGCAA GACCTGGGAC
GACCCGAACC ACATGAAGTT CTTCAACGAC GGCGCGGTCA ACTATCCGTA CGTGTCCGAC
GGCGCCTGGT TCCTGACCCA GCACAAGCGC TGGGGCCTGC TCAAGGCCGA CGTCGACTAC
CTCGGCGTGG CCCGCGCGAT CAACAAGACC GAGATCTACA AGCAGGCGGC TGCGCAGGTC
AAGGTCAACC TGCCCAAGAG CGACATGCGC AGCAGCAAGC TGATCGACGG CGTGGTCTGG
GACGGCAAGG ATCCGGCCAA GTACGCCGCG GGTTTCAAGA TCAAGGTGGC CTGA
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| Protein sequence | MTMPQDPVTP VNLPRRDFLQ RAAAVSGALA VPGGAWAAGS DAPEKKEVRI GFIPLTDCAS
VVMASVLKFD EKYGIKIIAS KEASWAAVRD KLVNGELDAA HVLYGLVYGV HLGISGPKKD
MAVLMTLNNN GQAITLSKKL ADKGAVDGAG LAKLMKAEPR EYTFAQTFPT GTHAMWLYYW
MAANGINPMT DAKVIVVPPP QMVANMRVGN MDGFCVGEPW NHRAIMDGIG VTAVTTQDIW
RDHPEKVLGA TNDFVTKNPN TARAMVMAIL EASRWIDTGL QNKMKMAETV AEKSYINTSV
DAINQRILGR YQNGMGKTWD DPNHMKFFND GAVNYPYVSD GAWFLTQHKR WGLLKADVDY
LGVARAINKT EIYKQAAAQV KVNLPKSDMR SSKLIDGVVW DGKDPAKYAA GFKIKVA
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