Gene Lcho_3761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3761 
Symbol 
ID6163998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp4218915 
End bp4219574 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content73% 
IMG OID641666534 
Producthypothetical protein 
Protein accessionYP_001792780 
Protein GI171060431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.330518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCACG ACCGCCCCCC CGCCGTCCAC GCCGACGACC TGCTGCCCTT CAGCCCCGCC 
GCCGAGCGCA ACCAGGGCCC CATCCTCGAG GTGCTGACGC ACCTGCTGCC GGCCCGTGCC 
GCGGTGCTCG AGATCGCCAG CGGCACCGGC CAGCACGCTG CGCACTTTGC CGCCGCGCGA 
CCGCACTGGC ATTGGCAGCC CACCGACGCC GATGCGCAAA GCCTGCCGGC GATCGAGGCC 
CGCTGCGCTG CGCTGCACAA CGTGCGCAGT CCGCTGCAGC TCGACGTGCT GGCCGCGGTC 
TGGCCGCAGG GGCCGGGCAC CTTCGACGCC TTCAAGTTCG ACGCGCTGTT CTGCGCCAAC 
ATGCTGCACA TCTCGCCGTG GGCGACCTGC GCGGCGCTGA TGTGCGGCGC CGCGCGGCAC 
CTGCGCCCGG GTGGCGTGCT GGTGCTCTAC GGGCCGTTCG TGGTCGACGG CGTCAGCACC 
GCACCGGGCA ATCGGGCCTT CGATGCCGAT CTGCGCGCAC GCGATCCGCA ATGGGGCCTG 
CGCCGGCTGG CCGACGTGAT GGGCGAGGCG CAGGCCTGCG GCCTGCACTT CGAGCAGCGC 
TTCGAGATGC CGGCCAACAA CCTGATGGTG GCGCTGCGGC TTCAGGGCGT GGCGGGCTGA
 
Protein sequence
MNHDRPPAVH ADDLLPFSPA AERNQGPILE VLTHLLPARA AVLEIASGTG QHAAHFAAAR 
PHWHWQPTDA DAQSLPAIEA RCAALHNVRS PLQLDVLAAV WPQGPGTFDA FKFDALFCAN 
MLHISPWATC AALMCGAARH LRPGGVLVLY GPFVVDGVST APGNRAFDAD LRARDPQWGL 
RRLADVMGEA QACGLHFEQR FEMPANNLMV ALRLQGVAG