| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3735 |
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| Symbol | |
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| ID | 6163768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4176890 |
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| End bp | 4178269 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666508 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001792754 |
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| Protein GI | 171060405 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC CTGACCCGAC GCTGTCGACG CATGCGGACG AGCACTGGCC ACGCGCCAGC
GTGCTGGTGG TCGACGACGA ACCCGGCATG CGCCACTTCC TCGAAAAGGC GCTGGCGCCG
CGCGTCGGCC AGGTCTTCAC CGCCGGCTCG GCCGAAGAGG CCGAGCTGCT GCTGCAGCAG
CACCGCATCG ACCTGGTGCT GCTCGACATC GCGCTGCCCG GCAAGAACGG CATCGCGCTA
CTCAAGGACA TGCGCGCCCA GGGCATCGGC GCCGAGGTGG TGCTGATCAC GGCGTTCGCC
GATCTGGAGA CCGCCATCGA GGCGCTGCGT GCCGGGGCCG GCGACATGCT GCTGAAACCC
TTCCGCGTCA CGCAGGCGCT CGGCGCGGTG CGCCACGGCC TGGAGCGCGC CCAGCTGCGG
CGCGAGAACT GGGTGCTGCG CCGCACGCTG AGCCAACGCA CGCCGCCGGC CGACGGGCTG
GTCGGGCAGT CGATCGTCGT CAAGGGCCTG CAGGCGGCGC TGCGCCGGGT GGCCACGGTC
GACTCGACCG TGCTGCTGAC GGGTGAATCG GGCACCGGCA AGGAGCTCGC GGCGCTGGCC
TTGCATCACC TGAGCCCGCA CGCGGCGGGG CCGTTCGTGC CGGTCAACTG CGCCACCACC
GCGCCCGAGC AGCTCGAAGC CGAGCTGTTC GGCCACAGCG GCCGCGGGCC GGGGCGCGAG
GGCCTGTTGA TCGACGCACA AGGCGGCACG ATCTTCTTCG ACGAGGTGGC CGAGCTGCCG
CTGGCGCTGC AGGCCACGCT GCTGCGCGTG CTCGAAGACC GCCGCGTGCG CCCGGTGGGC
AGCGACCGCG CCATCCCGAT CGACGTGCGC ATCATCGCCG CCACCAACCG GCCGCTGATC
GACGACGTGC GCTCGGGGCG CTTTCGCGCC GACCTGTTCT ACCGCCTGCA GGTGGTCGAG
ATCAAGCTGC CGCCGCTGCG TGCGCACAAG GAAGACATCC CCGACCTGGT GGCGCATTTC
ATCGACACGC TGGCGCCGCG CCTGGGCGTG CCGCCGATCG AGGTCACGGC CGACGAGATG
GGCTATCTGC GGCAGTACGA CTGGCCGGGC AACGTGCGCG AGCTGCGCAA CCTGCTGGAG
CGCTCGCTGA TCGTCGGCGC GCTCAACGTC TCGGCGCTCT ACCAGAGCCT GCCGCGGCCG
GCGCCGTCGC GGCCAGCGCC TGCGCCGGCT GCCGCGCCGA CCGACCTGCA CACGCTCGAA
AAGCGCCACA TCCTGGCGGT GCTCGAATCG GTCGGCGGCG ACAAGACCCA GGCGGCGCAG
CTCCTGGGCA TCTCGCGGCG CACGCTGGAG CGGCGCGTGG CCGAGTGGTC GCAGGCCTGA
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| Protein sequence | MNAPDPTLST HADEHWPRAS VLVVDDEPGM RHFLEKALAP RVGQVFTAGS AEEAELLLQQ
HRIDLVLLDI ALPGKNGIAL LKDMRAQGIG AEVVLITAFA DLETAIEALR AGAGDMLLKP
FRVTQALGAV RHGLERAQLR RENWVLRRTL SQRTPPADGL VGQSIVVKGL QAALRRVATV
DSTVLLTGES GTGKELAALA LHHLSPHAAG PFVPVNCATT APEQLEAELF GHSGRGPGRE
GLLIDAQGGT IFFDEVAELP LALQATLLRV LEDRRVRPVG SDRAIPIDVR IIAATNRPLI
DDVRSGRFRA DLFYRLQVVE IKLPPLRAHK EDIPDLVAHF IDTLAPRLGV PPIEVTADEM
GYLRQYDWPG NVRELRNLLE RSLIVGALNV SALYQSLPRP APSRPAPAPA AAPTDLHTLE
KRHILAVLES VGGDKTQAAQ LLGISRRTLE RRVAEWSQA
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