Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3730 |
Symbol | |
ID | 6163763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4172390 |
End bp | 4172869 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641666503 |
Product | hypothetical protein |
Protein accession | YP_001792749 |
Protein GI | 171060400 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.485732 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAGC GCCCCACACT GAATGTCGCG GTGCTCATCG AGCGCCAGAA GCAGCCTTCT CGCTGGGAGG ACTGGCGATT GCGCATCGCC GACGTGCTGC TCGACGACGG CCGCTTCGGC AGCGAGCCGC GCACGCTGCG CGACGACGGC ATCAACGCCC AGATCCTGCA CCCGGGCCTG ACCGTCACGC TGTACCGCGA CGAGGGCGAG GGCTATCACC TCAACCTGAC CTCGGGCGCG CCGGTCTGGT TCGTGATGTG GCGCATCGAC GAGGCCGATC CGTCGCGCGC CTGGCCCGAG CTGGTCACGC TGTCGTACAA CGAGGCTGGC CGCCTGCTCG ACGCGCAGGA GCGGGTCGAC AACACGCCAC TGCCCGCCGA CGTGCGCGAG TGGCTGCAGG CCTACACCGA CGAAAACTAT CGCCCCGAGG TCAAGCAGCG CAAGCGCCCG GCGTCGTTCA AGACGCCCGA ACGGCGGTGA
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Protein sequence | MTERPTLNVA VLIERQKQPS RWEDWRLRIA DVLLDDGRFG SEPRTLRDDG INAQILHPGL TVTLYRDEGE GYHLNLTSGA PVWFVMWRID EADPSRAWPE LVTLSYNEAG RLLDAQERVD NTPLPADVRE WLQAYTDENY RPEVKQRKRP ASFKTPERR
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