Gene Lcho_3730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3730 
Symbol 
ID6163763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4172390 
End bp4172869 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content69% 
IMG OID641666503 
Producthypothetical protein 
Protein accessionYP_001792749 
Protein GI171060400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.485732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC GCCCCACACT GAATGTCGCG GTGCTCATCG AGCGCCAGAA GCAGCCTTCT 
CGCTGGGAGG ACTGGCGATT GCGCATCGCC GACGTGCTGC TCGACGACGG CCGCTTCGGC
AGCGAGCCGC GCACGCTGCG CGACGACGGC ATCAACGCCC AGATCCTGCA CCCGGGCCTG
ACCGTCACGC TGTACCGCGA CGAGGGCGAG GGCTATCACC TCAACCTGAC CTCGGGCGCG
CCGGTCTGGT TCGTGATGTG GCGCATCGAC GAGGCCGATC CGTCGCGCGC CTGGCCCGAG
CTGGTCACGC TGTCGTACAA CGAGGCTGGC CGCCTGCTCG ACGCGCAGGA GCGGGTCGAC
AACACGCCAC TGCCCGCCGA CGTGCGCGAG TGGCTGCAGG CCTACACCGA CGAAAACTAT
CGCCCCGAGG TCAAGCAGCG CAAGCGCCCG GCGTCGTTCA AGACGCCCGA ACGGCGGTGA
 
Protein sequence
MTERPTLNVA VLIERQKQPS RWEDWRLRIA DVLLDDGRFG SEPRTLRDDG INAQILHPGL 
TVTLYRDEGE GYHLNLTSGA PVWFVMWRID EADPSRAWPE LVTLSYNEAG RLLDAQERVD
NTPLPADVRE WLQAYTDENY RPEVKQRKRP ASFKTPERR