| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3721 |
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| Symbol | |
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| ID | 6161732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4163882 |
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| End bp | 4164985 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666494 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_001792740 |
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| Protein GI | 171060391 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.339406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAAA ACCTCCTGCG CGCCAGCGTG TCCACGCTGA TTGCCGCCGG TGCCGCATTC
ACCACCCCCG CTCTCCTGGC TGCCGATGGC GCCGCGGCCA AGCCGCCGCT GAAGGTCGCC
TTCGTCTACG TCAGCCCGGT CGGCACCGCC GGCTGGACCT ACCAGCACAA CATGGGCCGG
CTGGCGATGG AGAGCAAGCT CGGCGCGGCG GTGCAGACCA CCTACGTCGA GAACGTCGCC
GAAGGCCCCG ACTCCGAACG CGTGATGCGC GACCTGGCCG GGCAGGGCTA CCAGCTGATC
TTCGCCACCA GCTTCGGCTA CCTCGAGCCG GCGCTGAAAG TCGCGCAGGA GTTCCCCAAG
GTCGCCTTCG AGCACATGGG CGGCCACAAG ACCGCCGCCA ACGTCAACAG CTACAACGCC
CGTTTCTACG AGGGCCGCTA CCTCGCCGGC TACCTGGCCG GTCGCATGAG CAAGACCGGC
GTGACGGGTT ACGTGGCGGG CTTCCCGATC CCCGAGGTGA TCCAGGGCAT CAACGCCTAC
ACGCTGGGCA TGCGCGCGGC CAACCCGAAG GCGCAGGTCA AGGTGACGTG GCTGAACACC
TGGTTCGACC CGGCCAAGGA GCGTGACGCC GCGCTGGCGC TGCTCGGCCA GGGTGCCGAC
ACGCTGACCC ACCACAGCGG CTCGACCGCC ATCCCGCAGC TGGCCGAGGA GAAGGGCGTG
ATGCTGCTGG GCTACCAGAG CGACATGCGC CACATCGCGC CCACCGCGCA GCTGACCAGC
GTCACGCACG TCTGGGGCGA GCGCTACACG CAGGTGGCGC AGGCGGTGGC GGCCGGGCGC
TGGAAACCGC AGCCCTACTG GGCCGGGCTG CGCCAGGGCG TGATCAAGAT GGCGCCGCTC
GCCAAGACCG TGCCGGCCGA CGTCGAACAT CAGTTCCGCG AACGCGAGCG TGCCATCGCG
ATGGGCAAGC TGCATCCGTT CGGCGGCAAG CTGGTCGACC AGGACGGCCG CGTGCGTCAG
TCCGGAGGTT CGATGGCCGA CGCCGGCATC GCGCGCATGG ACTTCTTCGT GCAAGGCGTG
GTCGGCAGCT TGCCCAAGCC CTGA
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| Protein sequence | MYKNLLRASV STLIAAGAAF TTPALLAADG AAAKPPLKVA FVYVSPVGTA GWTYQHNMGR
LAMESKLGAA VQTTYVENVA EGPDSERVMR DLAGQGYQLI FATSFGYLEP ALKVAQEFPK
VAFEHMGGHK TAANVNSYNA RFYEGRYLAG YLAGRMSKTG VTGYVAGFPI PEVIQGINAY
TLGMRAANPK AQVKVTWLNT WFDPAKERDA ALALLGQGAD TLTHHSGSTA IPQLAEEKGV
MLLGYQSDMR HIAPTAQLTS VTHVWGERYT QVAQAVAAGR WKPQPYWAGL RQGVIKMAPL
AKTVPADVEH QFRERERAIA MGKLHPFGGK LVDQDGRVRQ SGGSMADAGI ARMDFFVQGV
VGSLPKP
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