| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3629 |
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| Symbol | |
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| ID | 6163226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4054919 |
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| End bp | 4055767 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666402 |
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| Product | 3-hydroxybutyryl-CoA dehydrogenase |
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| Protein accession | YP_001792648 |
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| Protein GI | 171060299 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.195119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATTC AGACCGTGGG CATCATCGGT GCCGGCACCA TGGGCAATGG CATCGCGCAG
GCTTGCGCGG TGGTCGGCCT GCGGGTGGTG ATGGTGGACA TCAGCGAGAC GGCCGTGGCC
AAGGGCCTGG CCACGATCGC CGGCAGCCTC GATCGCCTGA TCAAGAAGGA CAAGCTGACC
GCCGCGCAGA AGGACGCCGC GCTGGCGCTG ATCACCACCG CCACCGACTA CGCCGCGCTC
GCCGGCGCGC AGATCGTGAT CGAGGCCGCC ACCGAGAACG AGGCGCTCAA GGTCAGGATC
CTGCAGCAGC TCGACGCCCA GCTGGCGCCG GAGGTGATCG TCGCCACCAA CACCAGCTCG
ATCTCGATCA CCAAGCTGGC CGCCGCCACG CAGCGCGCCG ACCGCTTCAT CGGCATGCAC
TTCTTCAACC CGGTGCCGAT GATGGCGCTG GTGGAGATCA TCCGCGGCCT GCAGACCAGC
GACGCCACCC ATGAGGCGGT CAAGGCGCTG TCGCAGCGGC TGGGCAAGTC GCCGATCACG
GTCAAGAACG CACCGGGTTT CGTCGTCAAC CGGATCCTGA TCCCGATGAT CAACGAGGCC
TTCTTCGTGC TGGCCGAAGG CATCGCCACG CCCGAGGACA TCGACGCGGG CATGAAGCTC
GGCTGCAACC AGCCGATCGG CCCGCTGGCG CTGGCCGACA TGATCGGCCT GGACGTCTGC
CTGGCGGTGA TGAACGTCTA CATGGCCGAA TACAACGACA GCAAGTACCG CCCGGCGCCG
CTGCTCAAGG AGATGGTCGC CGCCGGCTGG CTCGGCCGCA AGAGCGGTCG CGGCGTCTAC
ACCTACTGA
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| Protein sequence | MSIQTVGIIG AGTMGNGIAQ ACAVVGLRVV MVDISETAVA KGLATIAGSL DRLIKKDKLT
AAQKDAALAL ITTATDYAAL AGAQIVIEAA TENEALKVRI LQQLDAQLAP EVIVATNTSS
ISITKLAAAT QRADRFIGMH FFNPVPMMAL VEIIRGLQTS DATHEAVKAL SQRLGKSPIT
VKNAPGFVVN RILIPMINEA FFVLAEGIAT PEDIDAGMKL GCNQPIGPLA LADMIGLDVC
LAVMNVYMAE YNDSKYRPAP LLKEMVAAGW LGRKSGRGVY TY
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