Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3620 |
Symbol | |
ID | 6163299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4042381 |
End bp | 4043316 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641666393 |
Product | phosphoesterase PA-phosphatase related |
Protein accession | YP_001792639 |
Protein GI | 171060290 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.000326063 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCATGCAC CTGTCGTCGA ATTCGATCCC CTCGCCGGCC CGGCCCCGAT CCTCGGCCGC ACCGACTGGC TGCTCTGCCT CGGCGCCCTG GCTCTGGCCG TCGGCCTGCG CGTCAGCGGC TTCGACCGGG CGCTGTTCCA CCTGATCAAC GCCCCGGCCG CGCAGGCCGC CACGCTGTGG TCGATGCTCA GCGTGGCCGG CCTGGGCCTG AGCGCGCTGC TGCTGTGCCT GTCGCTGCTG CCCGGCCCGG CCCCGGCAAA CAACCGCCAT GCCCCGCTCG ACCCGGCACC GGCGGCGGCA CTGATCGGCG GCCTGCTGCT GTGTTTCCCG ATCGGCGGCG CGCTCACGCA CCTGTTCAAG TTCGCGCTGG CCCTGCCACG CCCGAGCGCG GTGCTGCCGG CCGGCGATCT GGTGGTGATC GGCGACGCGC TGCTGCGCAA CTCGATGCCG TCCGGCCACG CCGTCACGGC GTTCGCGATG GCCGGCCTGC TGACACGTTG CCTGCGGCTC GACGGCGGGC CGCGCCTGGC CGTGTTCGGC GTGGCCGCGG CGATCGCCTG CTCGCGCATC AGCACCTCGG CACACTGGCC CAGCGACGTG CTGGCCGGTG CCGCGCTGGG CTGGCTGGTC GCGCCGCTGG CGGTGCAGAT CGCCGGACGG CTGGGCCTGA CGCGCTGGCT GTGCGGACGC TCGGCACACC GGCCGCTGCT GCTGGCCGCA CTGATCCCGG CAATCGTGAT GGCGACGATG AACACCGGCT ATCCGCTGGC GCGCCCCGCG CAATGGGCGC TGGCCGCGAT CGGGCTGCTG GCGGCCTGGC GCCAGTCCGG CCTGCTGCAC ACGCAGCGGC GCACGCAGGC ATTCGACTGG CTGCGACGCC AGGCGCTGCG GGCCGCGGCC GAGCTGCGTG CGGGCCGCGC CGGTGGGGCC ACTTGA
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Protein sequence | MHAPVVEFDP LAGPAPILGR TDWLLCLGAL ALAVGLRVSG FDRALFHLIN APAAQAATLW SMLSVAGLGL SALLLCLSLL PGPAPANNRH APLDPAPAAA LIGGLLLCFP IGGALTHLFK FALALPRPSA VLPAGDLVVI GDALLRNSMP SGHAVTAFAM AGLLTRCLRL DGGPRLAVFG VAAAIACSRI STSAHWPSDV LAGAALGWLV APLAVQIAGR LGLTRWLCGR SAHRPLLLAA LIPAIVMATM NTGYPLARPA QWALAAIGLL AAWRQSGLLH TQRRTQAFDW LRRQALRAAA ELRAGRAGGA T
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