Gene Lcho_3601 details

Gene Information

• Locus tag: Lcho_3601
• ID: 6161835
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 4019842
• End bp: 4021902
• Gene Length: 2061 bp
• Protein Length: 686 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 641666374
• Product: polyphosphate kinase
• Protein accession: YP_001792620
• Protein GI: 171060271
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0855] Polyphosphate kinase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 33
• Fosmid unclonability p-value: 0.487429
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCATGGCA TGCCCGAATC AGATTCCCAG CAGCGCCTGA CCCTGCTCAA CCGCGAACGC 
GCGATCCTTG CCTTCAACCG CCGCGTGCTG GCCCAGGCAC GCCGCAATGA CGTGCCGCTG 
CTCGAGCGGC TGCGCTACGT CTGCATCGTC TCGTCGAACA TGGACGAGTT CTTCGAGGTG 
CGTTTCGCCG ACGCGCTCGA AGCCGCCATC GAGACCGGCA GCAACACCAC GCGCAGCGAG 
CTGGCGGTGG TGGCCGGCGA GGCGCACGAG CTGATCGACC AGCAGTACGC CATCTTCAAC 
GACGAGCTGA TGCCCGCGCT GGCCGCGCAC GGCATCGTCA TCGTCAACCA CGCCGATCGC 
AACGAAGCCC AGCGCAAGTG GGTGTCGCAG CTGTTCCACC GCGAGGTGCA TCCGCTGCTG 
ACGCCGCTCG GGCTCGATCC GGCGCATCCG TTTCCGCAGG TCGCCAACAA GTCGCTGAAC 
TTCATCGCCC AGCTCGGCGG CATGGACGCC TTCGGCCGCG AGAACAGCAT CGCCATCGTC 
AAGGTGCCGC GTGCGCTGCC GCGCGTGATG CGCCTGCCCG ACCGGCTGGC CGAGGGCAAG 
CAGGCCTTCG TGCTGCTGTC GAGCGTGATC CGCGCCCACC TCGGCGAGCT GTTCCCGGGC 
CGCATCGTCG AAGCGTTCTC GCAGTTCCGC GTCACCCGCG ATTCGGATCT CGATGTCGAC 
GAGGACGAGG TCACCGACCT GCGCAAGGCC CTGCGCAGCG AGCTGAGCGC GCGCCACTAC 
GGCCGCGCGA TCCGGCTCGA GGTGGTCAAC ACCTGCCCCG AGGTGCTGAG CAACTTCCTG 
CTCAGCCAGT ACGGCCTGCC CGAGGCGGCG CTGCACCGCG TCAACGGGCC GGTCAACCTG 
GTGCGGCTCA ATTCGCTGAT CGACCAGGCG CACGCGCCCA AGCTGCGCTT CAAGCCGCAC 
GAGCCGGTCT GGCCACATGG CCGGCTGCCG CGCACGCGGC CGCTGATGGC CAGCATCGCC 
GAGCGCGACA TCCTGCTGCA TCACCCGTTC GAGTCGTTCG AGCCGGTGGT GCAGTTCCTG 
CGCGAGGCCG TCAACGACCC GCAGGTGCTG GCGATCAAGC AGACCATCTA CCGCACCGGC 
AGCGAGTCGG TGCTGATGGA GCTGCTGATC GAGGCGGCGC AGCGCGGCAA GGAGGTGCTG 
GTGGTGGTCG AGCTGAAGGC GCGCTTCGAC GAGGAGGCCA ACATCAACTG GGCCGAGCGG 
CTGGAGGCGG TGGGTGCGCA AGTGGTCTAC GGCATCGTCG GCCTCAAGAC CCACGCCAAG 
CTGCTGCTGG TCACGCGCAA GCAGGGCCAG CGCATGGTGC GCTACGTGCA CCTGTCGACC 
GGCAACTACA ACCCCAAGAC CGCGCGGCTC TACACCGACG TCGGCTACTT CAGCGCCGAC 
CCCGACCTGA CCGCCGACGC CGAAGGCGTG TTCCAGCACC TGGCCAGCCT CAACACGCTG 
CGCACGCCCA AGCACCTGCT GGTCGCGCCC AGCAACCTGC ACGCGCAGAT GGTGGCGCTG 
CTCGGCCGCG TCGCCCAGGC CGCGCGGGAC GGCCAGCCCG CGCGCGTGGT CGCCAAGTTC 
AACGCGCTGA CCGATCCGGG CCTGATCGCC GCGCTGGTCG CGGCCAGCCA GGCCGGCGCC 
GACATCGACC TGATCGTGCG CGGCGCCTGC ATGCTGCCGC CCGGCGTGGC CGGCTACACC 
GACAACATCC GGGTGCGCTC GGTGGTCGGA CGTTTTCTCG AACACAGCCG GGTCTTCTAC 
TTCCGCTGGG GCGCGCGCGA GAGCCAGGAG GCGCTGTATC TCAGCAGCGC CGACTGGATG 
AGCCGCAACA TGCACGGCCG CATCGAGATC GCCTGGCCGG TGCGCGACCC GACGCTGCGC 
CAGCGCGTCA TCGACGAATG CCTGGTGCCC TACCTGCGCG ACGACATCGA CGCCTGGACG 
CTCGACGCTC ACGGCGGCTA CGTCGCCGTG CAGGGTCCGG GGGGGCTGAG CGCGCAGCGC 
GCCCTGGTGC GCCGGTACTG A 

 

Protein sequence

MHGMPESDSQ QRLTLLNRER AILAFNRRVL AQARRNDVPL LERLRYVCIV SSNMDEFFEV 
RFADALEAAI ETGSNTTRSE LAVVAGEAHE LIDQQYAIFN DELMPALAAH GIVIVNHADR 
NEAQRKWVSQ LFHREVHPLL TPLGLDPAHP FPQVANKSLN FIAQLGGMDA FGRENSIAIV 
KVPRALPRVM RLPDRLAEGK QAFVLLSSVI RAHLGELFPG RIVEAFSQFR VTRDSDLDVD 
EDEVTDLRKA LRSELSARHY GRAIRLEVVN TCPEVLSNFL LSQYGLPEAA LHRVNGPVNL 
VRLNSLIDQA HAPKLRFKPH EPVWPHGRLP RTRPLMASIA ERDILLHHPF ESFEPVVQFL 
REAVNDPQVL AIKQTIYRTG SESVLMELLI EAAQRGKEVL VVVELKARFD EEANINWAER 
LEAVGAQVVY GIVGLKTHAK LLLVTRKQGQ RMVRYVHLST GNYNPKTARL YTDVGYFSAD 
PDLTADAEGV FQHLASLNTL RTPKHLLVAP SNLHAQMVAL LGRVAQAARD GQPARVVAKF 
NALTDPGLIA ALVAASQAGA DIDLIVRGAC MLPPGVAGYT DNIRVRSVVG RFLEHSRVFY 
FRWGARESQE ALYLSSADWM SRNMHGRIEI AWPVRDPTLR QRVIDECLVP YLRDDIDAWT 
LDAHGGYVAV QGPGGLSAQR ALVRRY