Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3597 |
Symbol | |
ID | 6162590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4015769 |
End bp | 4016245 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641666370 |
Product | dehydratase |
Protein accession | YP_001792616 |
Protein GI | 171060267 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.43263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCCGA TGAACGGCCA CGACATCGAG GACCTGCGCC CCGGCATGCA GGCCACCTTT TCCAAGACCA TCACCGAAGC CGACATCGTG CTGTTCGCCG GTGTCTCGGG CGACAACAAC GCCGTTCACA CGAACGAGGA GTTCGCGCAG ACCACGGCCT TCGGCGGGCG CATCGCGCAC GGCTTCCTGA CCGCCAGCGT GATCTCGGCC GCGGTGGCGA ACCGGCTGCC CGGCCCGGGT ACGGTCTACC TCGGCCAGCA GATGAAGTTC TGCGCCCCGG TGCGCCCAGG TGACACGGTG CATGCGACGG TCACCGTGCT GTCGGTCGAC GAGGCGCGCG CACGCGCGGT GCTGTCGACC GTCTGCCGCG TCAGGGAGAC GGTGGTGATC GAAGGTGAAG CGACGGTGAT GACGACCTCT CAACGGCGCC GCCAGGCCGC GGCGCCAGCC CCAACCGCGG CCCGTGTGGC CGCCTGA
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Protein sequence | MNPMNGHDIE DLRPGMQATF SKTITEADIV LFAGVSGDNN AVHTNEEFAQ TTAFGGRIAH GFLTASVISA AVANRLPGPG TVYLGQQMKF CAPVRPGDTV HATVTVLSVD EARARAVLST VCRVRETVVI EGEATVMTTS QRRRQAAAPA PTAARVAA
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