Gene Lcho_3597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3597 
Symbol 
ID6162590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4015769 
End bp4016245 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content69% 
IMG OID641666370 
Productdehydratase 
Protein accessionYP_001792616 
Protein GI171060267 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.43263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGA TGAACGGCCA CGACATCGAG GACCTGCGCC CCGGCATGCA GGCCACCTTT 
TCCAAGACCA TCACCGAAGC CGACATCGTG CTGTTCGCCG GTGTCTCGGG CGACAACAAC
GCCGTTCACA CGAACGAGGA GTTCGCGCAG ACCACGGCCT TCGGCGGGCG CATCGCGCAC
GGCTTCCTGA CCGCCAGCGT GATCTCGGCC GCGGTGGCGA ACCGGCTGCC CGGCCCGGGT
ACGGTCTACC TCGGCCAGCA GATGAAGTTC TGCGCCCCGG TGCGCCCAGG TGACACGGTG
CATGCGACGG TCACCGTGCT GTCGGTCGAC GAGGCGCGCG CACGCGCGGT GCTGTCGACC
GTCTGCCGCG TCAGGGAGAC GGTGGTGATC GAAGGTGAAG CGACGGTGAT GACGACCTCT
CAACGGCGCC GCCAGGCCGC GGCGCCAGCC CCAACCGCGG CCCGTGTGGC CGCCTGA
 
Protein sequence
MNPMNGHDIE DLRPGMQATF SKTITEADIV LFAGVSGDNN AVHTNEEFAQ TTAFGGRIAH 
GFLTASVISA AVANRLPGPG TVYLGQQMKF CAPVRPGDTV HATVTVLSVD EARARAVLST
VCRVRETVVI EGEATVMTTS QRRRQAAAPA PTAARVAA