| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3594 |
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| Symbol | |
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| ID | 6162587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4012103 |
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| End bp | 4012987 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666367 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001792613 |
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| Protein GI | 171060264 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.577522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCT TCGGCATCCC CAGCAAGGCG CTGTTCGGCC AGCTGCTGCT CGGGCTCATC
AACGGCTCGT TCTACGCCGT GCTGAGCCTG GGTCTGGCTG TGATCTTCGG CCTGCTCAAC
ATCATCAACT TCTCCCACGG CGCGCTCTAC ATGGTGGGCG CCTTCGTGGC CCTGCTGGGC
CTGAACCACC TGGGCATGAG CTACTGGACG GCGCTGCTGG TGGCGCCGGC GCTGGTGGGC
GCGCTGGGCA TGCTGATCGA GCGCACGATG CTCAAGCACC TGTACAAGCT CGATCACCTC
TACGGCCTGC TGCTGACCTT CGGGCTGGCG CTGATCGGCG AGGGGCTGTT CCGCTACTAC
TTCGGTGTGT CGGGCGAGTC GTACCCGGTG CCCGAGCAGT TGCAGGGCGG TGTCGACCTG
GGTTTCATCT TCCTGCCGCT CTACCGCGGC TGGGTGGTGC TGGCCTCGCT GGCGGTCTGC
ACGGCCACCT GGTACCTGAT CGAGCGCACG TCGCTGGGCG CCACGCTGCG CGCCGCCACC
CAGCGGCCTG ATCTGGTGCA GGCGCTGGGC ATCAACGTGC CGCTGATGGT CACGTTGACC
TACGGCGCCG GCGTGGCGCT GGCGGCCTTT GCCGGCGTGC TGGCGGCGCC CGTGATCCAG
GTCAATCCGG TGATGGGCTC GAACCTGATC ATCGTGGTGT TCGCGGTGGT GGTGATCGGC
GGCATGGGCT CGATCGCCGG CTCGATCATC ACCGGCCTGG GGCTGGGCGT GATCGAGGGC
CTGACCAAAG TGATCTACCC GGAGGCCTCG GCGGTCGTGA TCTTCGTGAT CATGATCGTG
GTGCTGCTGT TCCGTCCCGC CGGCCTGTTC GGCAAGCAGG CGTGA
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| Protein sequence | MELFGIPSKA LFGQLLLGLI NGSFYAVLSL GLAVIFGLLN IINFSHGALY MVGAFVALLG
LNHLGMSYWT ALLVAPALVG ALGMLIERTM LKHLYKLDHL YGLLLTFGLA LIGEGLFRYY
FGVSGESYPV PEQLQGGVDL GFIFLPLYRG WVVLASLAVC TATWYLIERT SLGATLRAAT
QRPDLVQALG INVPLMVTLT YGAGVALAAF AGVLAAPVIQ VNPVMGSNLI IVVFAVVVIG
GMGSIAGSII TGLGLGVIEG LTKVIYPEAS AVVIFVIMIV VLLFRPAGLF GKQA
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