| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3560 |
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| Symbol | |
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| ID | 6161054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3979563 |
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| End bp | 3980486 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641666333 |
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| Product | periplasmic solute binding protein |
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| Protein accession | YP_001792579 |
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| Protein GI | 171060230 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.24573 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCG CTTCGCGTCG CAAGCTCCTG CTGGCGGGAC TTGGTTTTGG TGCCGGCCTG
ACCGCGTTCG GCCCCGCCCG AGCACAGTCC GCCAAGGCGC AGCCGCTGCG CCTGGTCGCC
AGTTTCTCGA TCCTGGCCGA CATCCTGCGG CAGATCGCCC CGGCCGACGC CGAGGTCGGC
GCGCTGGTCG GCCCCGAGGG CGACGCCCAC GCCTACGCGC CCACGCCCGG TGACGTCAAG
CGCCTGGCCG CCGCCGACCT GGTGGCGATC AACGGCCTCG GTTTCGAGGG CTGGATCGAG
CGGCTGGTCA AGGCCTCTGG CTACCGCGGC GTGCTGCAGG TGGCCAGCGC CGGGCTGGTG
CCGCGCAAGC TCGGCCCCAC GCCCGACCCG CACGCCTGGC ACGACCCGGC CAGCGTGCGC
CTGTACGTGC GCAACCTGAG CACCGCGCTG CAGGCCTTGC GCCCGGCGCA GGCGGCCAGC
GTGCGCGAGC GCACCGATGC CTATCTGCAG CAGATCGACC GCTTCGACCA CAGCGCCCGC
GCGCGCCTGG GTGCGATCCC CGAGAGCGGC CGGCGCGTCA TCACCTCGCA CGGCGGCTTC
GGTTATCTCG GCGGTGCCTA CGGACTGGAG TTTTTATCGC CGCTGGGCTG GCGCAACGAC
CAGGAACCCT CGGCCGCCGC GGTGGCGCGG CTGATCGCGC AGATCCGCAA GCTGCAGGTT
CGCGCGGTCT TCATCGACAG CCTGAAGGAC AGCCGCCTGA TGCAGCAGAT CGCGCGCGAC
AGCGGCGCCG TCGTCGGCGG GCAACTGCAC GGCGACGCGC TGACCCGCCC CGGCGGCGAG
GCCGACAGCT ATCTGCGGCT GATGGAACAC AACGTCGCGA CGCTGGCGAG TGCGCTCGGC
GCCGCGCCGG CCCCGCGCAA CTGA
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| Protein sequence | MNIASRRKLL LAGLGFGAGL TAFGPARAQS AKAQPLRLVA SFSILADILR QIAPADAEVG
ALVGPEGDAH AYAPTPGDVK RLAAADLVAI NGLGFEGWIE RLVKASGYRG VLQVASAGLV
PRKLGPTPDP HAWHDPASVR LYVRNLSTAL QALRPAQAAS VRERTDAYLQ QIDRFDHSAR
ARLGAIPESG RRVITSHGGF GYLGGAYGLE FLSPLGWRND QEPSAAAVAR LIAQIRKLQV
RAVFIDSLKD SRLMQQIARD SGAVVGGQLH GDALTRPGGE ADSYLRLMEH NVATLASALG
AAPAPRN
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