Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3531 |
Symbol | |
ID | 6161271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3950393 |
End bp | 3950641 |
Gene Length | 249 bp |
Protein Length | 82 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641666304 |
Product | F0F1 ATP synthase subunit C |
Protein accession | YP_001792550 |
Protein GI | 171060201 |
COG category | [C] Energy production and conversion |
COG ID | [COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K |
TIGRFAM ID | [TIGR01260] ATP synthase, F0 subunit c |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0499158 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACG TCCTCGGTCT CGTCGCTCTG GCTTGCGGCA TCATCATCGG CCTGGGTGCT ATCGGCGCCT GTATCGGTAT CGCCCTGATG GGTGGCAAGT ACCTCGAAGC TTCGGCCCGC CAGCCTGAGC TGATGAACGA ACTGCAGACC AAGATGTTCC TGCTGGCCGG TCTGATCGAC GCGGCCTTCC TGATCGGCGT CGGCATCGCG ATGCTGTTCG CCTTCGCGAA CCCGTTCGTC CTGAAGTAA
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Protein sequence | MENVLGLVAL ACGIIIGLGA IGACIGIALM GGKYLEASAR QPELMNELQT KMFLLAGLID AAFLIGVGIA MLFAFANPFV LK
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