Gene Lcho_3531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3531 
Symbol 
ID6161271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3950393 
End bp3950641 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content61% 
IMG OID641666304 
ProductF0F1 ATP synthase subunit C 
Protein accessionYP_001792550 
Protein GI171060201 
COG category[C] Energy production and conversion 
COG ID[COG0636] F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 
TIGRFAM ID[TIGR01260] ATP synthase, F0 subunit c 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0499158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACG TCCTCGGTCT CGTCGCTCTG GCTTGCGGCA TCATCATCGG CCTGGGTGCT 
ATCGGCGCCT GTATCGGTAT CGCCCTGATG GGTGGCAAGT ACCTCGAAGC TTCGGCCCGC
CAGCCTGAGC TGATGAACGA ACTGCAGACC AAGATGTTCC TGCTGGCCGG TCTGATCGAC
GCGGCCTTCC TGATCGGCGT CGGCATCGCG ATGCTGTTCG CCTTCGCGAA CCCGTTCGTC
CTGAAGTAA
 
Protein sequence
MENVLGLVAL ACGIIIGLGA IGACIGIALM GGKYLEASAR QPELMNELQT KMFLLAGLID 
AAFLIGVGIA MLFAFANPFV LK