| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3513 |
|---|
| Symbol | |
|---|
| ID | 6161358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 3926769 |
|---|
| End bp | 3927176 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641666286 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001792532 |
|---|
| Protein GI | 171060183 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3536] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.00164721 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAG TCGCACGCAT CCGTCCCACC GCCTTGACGC TGCACCAGCG CACGCGCGTG
CTGGCCATCG AGTTCGCTGA CGGCAGCGCG TTCGAGCTGC CTTTCGAGCT GCTGCGGATC
TGCTCGCCGT CGGCCGAAGT CCAGGGTCAT GGCCCGGGGC AGGAGGTCTT GCAGACGGGC
AAGCGCATGG TCGAGATCGT CGACGTCGAG CCGGTGGGGC ACTACGCGAT CCAGCCCCGG
TTCAGCGACG GCCACGACAC CGGCATCTTC ACCTGGGAGT ACCTGCACCA GCTCGGTGTC
AATCAGGCCC AGGTGTGGAG CGACTACGAG GCGCGCCTGA AGGCGGCAGG CGTGGATCGC
GACGCCCCGA TGCCGCCGAA GTCCGGCGGC GCGTGCGCCA GCCATTGA
|
|---|
| Protein sequence | MTEVARIRPT ALTLHQRTRV LAIEFADGSA FELPFELLRI CSPSAEVQGH GPGQEVLQTG
KRMVEIVDVE PVGHYAIQPR FSDGHDTGIF TWEYLHQLGV NQAQVWSDYE ARLKAAGVDR
DAPMPPKSGG ACASH
|
|---|
| |