| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3512 |
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| Symbol | |
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| ID | 6161357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3925964 |
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| End bp | 3926695 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641666285 |
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| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
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| Protein accession | YP_001792531 |
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| Protein GI | 171060182 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000892399 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGACA CGCATTTCGG ATTCAAGACG GTCGACGAGC GCCAGAAGGC CGATCTGGTT
CGAGGCGTCT TCGACTCGGT GGCATCGCGT TACGACGTGA TGAACGACGC CATGTCGATG
GGCATGCACC GGCTCTGGAA GGCCTACGCG GTCGCTGTTT CAGGTGCGCG GGAAGGCCAT
CAGGTGCTCG ACATCGCCGC CGGCACCGGC GACCTCACGC GGCAGTTCGC GCGCAAGGTC
GGGGCCAGCG GCACGGTCGT CCACACCGAC ATCAACGAGT CCATGTTGCG CACCGGACGT
GACCGGCTGC TCGACGAAGG GCTGCAACTC CCGACGGTGC TGTGCGATGC CGAGCGCCTG
CCGTTCCCTT CGGCCCGATT CGACATCGTC AGCGTGGCGT TCGGCCTGCG CAACATGACC
CACAAGGATG TGGCGTTGGG CGAAATGGCT CGGGTGCTCA AGCCCGGCGG CAAGCTCCTG
GTGCTGGAGT TCTCCCGTGT CGCCGAGCCG CTCCGGCGCG CGTATGACTG GTACTCGTTC
AACGTGCTGC CACGTCTCGG TCAGGTGCTC ACGGGTGATG CGCAGAGCTA CCGCTATCTG
GCCGAGTCGA TCCGCATGCA TCCGCCTCAG GCCGAGCTGA AATCGATGAT GAAGACGGCG
GGTTTCGGGC ACGTCGACGT GCACAACATG TCGGCCGGCG TGGTCGCCCT GCATGTCGGC
CTGAAGTGCT GA
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| Protein sequence | MSDTHFGFKT VDERQKADLV RGVFDSVASR YDVMNDAMSM GMHRLWKAYA VAVSGAREGH
QVLDIAAGTG DLTRQFARKV GASGTVVHTD INESMLRTGR DRLLDEGLQL PTVLCDAERL
PFPSARFDIV SVAFGLRNMT HKDVALGEMA RVLKPGGKLL VLEFSRVAEP LRRAYDWYSF
NVLPRLGQVL TGDAQSYRYL AESIRMHPPQ AELKSMMKTA GFGHVDVHNM SAGVVALHVG
LKC
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