| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3497 |
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| Symbol | ipk |
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| ID | 6160012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3910512 |
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| End bp | 3911387 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641666269 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001792516 |
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| Protein GI | 171060167 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000000057654 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCACAG CGCTCTACGA CCTGCTGGCC CCGGCCAAGC TCAACCTGTT CCTGCATGTC
ATCGGGCGCA GAGCCGACGG TTATCACCTC CTGCAATCGG TCTTCCGGCT GATCGACTGG
TGCGACACCC TGCATCTCGA ATTGCGTCGC AACGGCCAGA TCAGCCGCAG CGATCTCGGC
CCCGCACTGC CGGCCGACGA TCTGTGCCTG CGCGCCGCAC GGGCCCTGCA GACCGCCAGC
GGCACCCCCC TGGGCGTGCA CATCAGCATC GACAAGAAGG TGCCATGGGG CGCGGGCCTC
GGCGGCGGCA GCTCGGATGC GGCCACCACG CTGATCGGAC TCAACCGTCT GTGGCGACTG
GACTGGTCAC GAGAGCAGCT TGCGACCCTG GCCCTTCAAC TGGGTGCTGA CGTGCCGTTT
TTTGTCGGCG GACGCAATGC CTGGGTGGAA GGCATCGGCG AGAAACTCAC GCCGATCGAG
CTGCCCGGCG CCGCTTATGC TGTGGTGAAA CCCGAGGTCG CGATCCCGAC CGCTGCAATT
TTTTCGAGCC CCCTCTTGTC AAGGGACACT TCGCCCGCTA TAGTTGCGGA CTTTCTTGCA
GACACAAAGT CGTTTGGCAA AAATGATTTG CAGCGCAGCG CGCAAGCGCA CAGCGCCGAA
GTCAGCCAAG CACTGAGCTT GCTGGAACAC CATGTCGGCG CAAGCCGCAT GAGTGGATCA
GGAAGCGCCG TGTTTGCTTG TGCGGGGCTC GCGCCCGGTG CAAGCGCAAA GTCTGAAGGT
TGGCAGCAAG TCTTGGCGAC ATTGCCGCAA ACCTGGACAG CGCGCTGGTG CCACGGTCTG
GATGATCATC CCTTGTCGGG ATGGTCCAAG GACTGA
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| Protein sequence | MITALYDLLA PAKLNLFLHV IGRRADGYHL LQSVFRLIDW CDTLHLELRR NGQISRSDLG
PALPADDLCL RAARALQTAS GTPLGVHISI DKKVPWGAGL GGGSSDAATT LIGLNRLWRL
DWSREQLATL ALQLGADVPF FVGGRNAWVE GIGEKLTPIE LPGAAYAVVK PEVAIPTAAI
FSSPLLSRDT SPAIVADFLA DTKSFGKNDL QRSAQAHSAE VSQALSLLEH HVGASRMSGS
GSAVFACAGL APGASAKSEG WQQVLATLPQ TWTARWCHGL DDHPLSGWSK D
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