| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3489 |
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| Symbol | |
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| ID | 6160095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3900384 |
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| End bp | 3902087 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641666261 |
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| Product | DNA repair protein RecN |
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| Protein accession | YP_001792508 |
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| Protein GI | 171060159 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0497] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000536624 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCAAGC GACTGTCCCT GCGCGATTTC GTCATCGTCA CCACGCTCGA AGTCGACTTC
AGCGCCGGCT TCGCGGTGCT GACCGGCGAG ACCGGTGCCG GCAAATCGAT CCTGATCGAC
GCCCTGCAGC TCGCGCTCGG CGGCCGCGGC GACTCCGGCG TGGTGCGCGA AGGCGCCACG
CGGGCCGAGA TCAGCGCCGA GTTCGAGCCC GTCGATCCGG CCCTGACGGC CTGGCTCGAC
GAGGCCGGCT TCGGCACCGA CGACAGCCTG CTGCTGCGCC GCACGGTCGA CGCGCAGGGC
AAGAGCCGCG CCTGGATCAA CGGCAGCAGC GCCACGGTGG CGCAGCTGCG CGAGCTGGGC
GAGCAGCTGG TCGACATCCA CGGCCAGCAC GCCTGGCAGA GCCTGACCCG GCCGGCCTCG
GTGCGCGCCC TGCTCGACGC CTACGCCGGG CTCGACACCG GCGCGCTGGC GCAGGCCTGG
GCGCAGTGGC GCGAGCACCA GACCCGGCTC GATTCGGCAC GCGAGCGCGG CGGCGAGATC
GAGCGCGAAC GCGAGCGCCT GGCCTGGCAG ATCGGCGAGC TGGCCAAGCT GGCACCGGCG
GCCGACGAGT GGGCCGAGCT CAACGCCGAA CACGAACGCC TGGCGCACGC CCAGGCCATC
CTCGACGCCA CCCAGCTGGC CCTGCACCTC ACCAGCGAGG CCGACACCAG CGCCCGCGTG
CTGACCGGCC AGGCCGCGCA CGCGCTCGAA AGCGTGGCCG CCTACACCCC CGCGCTGGCC
AACGCGCTGG ACGTGCTGCG CGCGGTGCAG AACGAGCTGG CCGACGCCAC CCACAGCCTC
AACCTGGCAC TGCGCCACAC CGAACTCGAC CCCGACCGGC TGGCCCAGCT CGATGCCCGC
CTGGCCAGCT GGCTGAGCCT GGCGCGGCGC TATCGCCGCC AGCCCGAAGA CCTGCCCGCC
ACGCTGCAAG GCTGGCGCGA CGAGCTGCGC AGCCTGGAGG CCGCCGCCGA TCTGGCCACG
CTGGAGCAGG CCGCCGCGCA GGCCAAGGCG CTGCTGCTCG ACCAAGCCGC CCGGGTGTCG
GCGCGCCGCC GGCAGGCCGC GCCGCAGCTC GCCCAGGCGG TCAGCGCGGC GATGCAGGAT
CTCGGCATGG CCGGCGGGCG CTTCGAGGTG CTGCTGCAGC CGGCCGACGA GGTGCAGGCA
CACGGCCTGG AATCGGCCGA GTTCCTGGTC GCCGGACATG CCGGCAGCAC GCCGCGCCCG
CTCGCCAAGG TGGCCTCGGG CGGCGAACTC TCGCGCATCG CGCTGGCGAT CGCCGTCACC
ACCAGCCAGA TCCGGCTGGC CCAGGGCGCG GCGGCCGGCA CGCTGATCTT CGACGAGGTC
GATGCCGGCG TCGGCGGCGC GGTGGCCGAA ACCGTCGGCC GGCTGATGCA AAGACTCGGC
CGCGAGCGCC AGGTGCTGGC CGTCACCCAC CTGGCGCAGG TGGCGGCCTG TGCCGACCTG
CACCTGGTCG TCAGCAAGGC CAGCGCCGAG GGCCGCACGC ACAGCCAGAT CCGCGCGGTG
GCCGGCCAGC AACGCGTCAG CGAGATCGCC CGTATGCTGG GTGGCCAGCA GCTGTCCGGT
GCCGGACTGG CGCACGCCCA GGAAATGCTC GCCGCAGTGC AGTCGGACGA GCGATCGGCG
GGCACGCCAC CGGCGCGACG CTGA
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| Protein sequence | MLKRLSLRDF VIVTTLEVDF SAGFAVLTGE TGAGKSILID ALQLALGGRG DSGVVREGAT
RAEISAEFEP VDPALTAWLD EAGFGTDDSL LLRRTVDAQG KSRAWINGSS ATVAQLRELG
EQLVDIHGQH AWQSLTRPAS VRALLDAYAG LDTGALAQAW AQWREHQTRL DSARERGGEI
ERERERLAWQ IGELAKLAPA ADEWAELNAE HERLAHAQAI LDATQLALHL TSEADTSARV
LTGQAAHALE SVAAYTPALA NALDVLRAVQ NELADATHSL NLALRHTELD PDRLAQLDAR
LASWLSLARR YRRQPEDLPA TLQGWRDELR SLEAAADLAT LEQAAAQAKA LLLDQAARVS
ARRRQAAPQL AQAVSAAMQD LGMAGGRFEV LLQPADEVQA HGLESAEFLV AGHAGSTPRP
LAKVASGGEL SRIALAIAVT TSQIRLAQGA AAGTLIFDEV DAGVGGAVAE TVGRLMQRLG
RERQVLAVTH LAQVAACADL HLVVSKASAE GRTHSQIRAV AGQQRVSEIA RMLGGQQLSG
AGLAHAQEML AAVQSDERSA GTPPARR
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