| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3392 |
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| Symbol | |
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| ID | 6162080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3769980 |
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| End bp | 3770462 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666167 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792415 |
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| Protein GI | 171060066 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAAAAAT CCCGTCATGA CCTCTGGGTC GGCCTGTTCG TCGCCATCGG CGCGGCCGCC
CTGCTGTTCC TCGCGCTGAA GGCCGGCAAT CTGCTGGCGA TCTCGTTCGA GCCCACCTAC
CAGGTCGTCG CCCGCTTCGA CAACATCGGC GGCCTGAAAC CGCGTGCGGC GGTCAAGAGC
GCCGGCGTGG TGGTGGGGCG GGTGGCCAGC ATCACCTTCG ACGACAAGAG CTACCAGGCC
AGCGTGCACC TCGATCTCGA ACGGCGCTTC GCCTTCCCGA AGGACAGCTC GGCCAAGATC
CTGACCGCCG GCCTGCTGGG CGAGCAGTAC ATCGGCCTCG AGCCCGGCCC GGCCGAGAAC
AACCTGGCCG CCGGCGACGT CATCAGCCAG ACCCAGTCGG CCGTGGTGCT CGAGACTCTG
CTCAGCCAGT TCCTCTACAA CAAGGCGGCC GACGCAGGAA GCGGTGACGG AGCCGCCAAG
TGA
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| Protein sequence | MQKSRHDLWV GLFVAIGAAA LLFLALKAGN LLAISFEPTY QVVARFDNIG GLKPRAAVKS
AGVVVGRVAS ITFDDKSYQA SVHLDLERRF AFPKDSSAKI LTAGLLGEQY IGLEPGPAEN
NLAAGDVISQ TQSAVVLETL LSQFLYNKAA DAGSGDGAAK
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