Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3386 |
Symbol | |
ID | 6163370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3764517 |
End bp | 3765464 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641666161 |
Product | transaldolase B |
Protein accession | YP_001792409 |
Protein GI | 171060060 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCAGC TCGACCAACT CAAGCGCCTC ACCACCGTGG TCGCCGACAC CGGCAACTTC CTGCAGTTGG CGCAGTTCGC GCCGCAAGAT GCCACCACCA ACCCGTCGCT GATCCTCAAG GCGGTGCAGC AGGCCGAGTA CGCGCCGCTG CTGACCGAAA CCGTCGCCCG CCACCGCGGC CTGCCGCTCG ACCAGGTGGT CGACCAGGTG CTGGTGCGCT TCGGCCTCGA GATCCTGAAG ATCGTGCCCG GCCGCGTCTC GACCGAAGTC GACGCCCGCC TGAGCTTCGA CACCGCCGCC ACCGTGGCGC GCGCGCACCG CATCATCAAT CTGTACGACG ACGCCGGCAT CGGCCGCGAG CGGGTGCTGA TCAAGATCGC CTCCACCTGG GAAGGCATCC AGGCCGCCGC CGAGCTGGAG CGCGAGGGCA TCCACTGCAA CCTGACGCTG CTGTTCGCCT TCGCGCAGGC GGTGGCCTGC GGCGCAGCGG GCGTGCAGCT GATCTCGCCG TTCGTGGGCC GGATCTACGA CTGGTACAAG AAGTCGGCCG GCGCCAACTG GGACGAGGCC GCGATGGCCG GTGCCAACGA CCCCGGCGTG AAGTCGGTGG CGCAGATCTA CAGCTACTAC AAGAAGTTCG GCATCGCCAC CGAGGTGATG GGCGCGAGCT TCCGCAACGT CGGCCAGATC ACCGCGCTGG CCGGCTGCGA CCTGCTGACC ATCAGCCCCG ACCTGCTGGC GCAATTGCAG GCCAGCGAGG AGCCGATCAG CGCCGCCCTC GACGCCGCCG CGGCCCGCGA CGCCGCGATC GACGCGGTCC GCTACGACGA GCCCGGTTTC CGTTTCGCGC TCAACGAAGA CGCGATGGCC ACCGAGAAGC TTGCCGAAGG CATCCGCGCC TTCGCGGCCG ATGCCGCCAA GCTCGACAAG ATGATCCTGG CGCTCTGA
|
Protein sequence | MNQLDQLKRL TTVVADTGNF LQLAQFAPQD ATTNPSLILK AVQQAEYAPL LTETVARHRG LPLDQVVDQV LVRFGLEILK IVPGRVSTEV DARLSFDTAA TVARAHRIIN LYDDAGIGRE RVLIKIASTW EGIQAAAELE REGIHCNLTL LFAFAQAVAC GAAGVQLISP FVGRIYDWYK KSAGANWDEA AMAGANDPGV KSVAQIYSYY KKFGIATEVM GASFRNVGQI TALAGCDLLT ISPDLLAQLQ ASEEPISAAL DAAAARDAAI DAVRYDEPGF RFALNEDAMA TEKLAEGIRA FAADAAKLDK MILAL
|
| |