| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3372 |
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| Symbol | |
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| ID | 6161041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3748207 |
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| End bp | 3749103 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666147 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001792395 |
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| Protein GI | 171060046 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCT CCCCGTTCGA CGACTGGATG CGCACCGCGC TCGATCAGGT CGAGATCGAA
CTCGATCGCC AGGTGCCCGC CGACGCCCCC GCCGAACTCG GCCTGGCGAT GCGCTACGGC
GTGCTCGACG GCGGCAAGCG CCTGCGCCCG CTGCTGGTGC TGGCGGCGGC CGGCTGTGTC
GACGGCCACC CCGAGGCGGC CCTGCGCGCG GCCTGCGCGG TCGAGCTGAT CCACGCCTAT
TCGCTGATCC ACGACGACAT GCCGTGCATG GACAACGACG TGCTGCGGCG CGGCAAGCCC
ACCGTGCACG TGCAGTACGG CGAGGCCCGC GCGATGCTGG CCGGCGACGC GATGCAGGCG
CTGGCCTTCG AGGTGCTGAC GCCCGAAGAC ACCGACGATG GCGTGCCGCC GGCGCTGCAG
GCGCGCCTGT GCAGCCTGCT GGCGCGCGCC TCGGGCGTGC TCGGCATGGC CGGTGGCCAG
GCCATCGACC TGGCCCACGT GGGCAAGCAG ATGGACGAGG CCGCCCTGCA GGACATGCAC
GGCCGCAAGA CCGGCGCCCT GCTGCAGGCC AGCGTGCTGA TGGGCGCGGC CTGCGGCCGG
ACCACCCCGG CGCAATGGCA GGCACTGGCC GACTACGGCT GGGCGATCGG TCTGGCGTTC
CAGGTGGTCG ACGACATCCT CGACGTCACG CAGTGCGCCG AAACCCTGGG CAAGACCGCC
GGCAAGGACG CCGACCAGAA CAAGCCGACC TATGTCTCGC TGCTCGGACT CGAAGGCGCC
CGCGAGCGCG CCCAGTCCTT GCATGCCCAA GCCCACGCCG CGCTCGAACG CGGCGCATTC
GCCGACGCGC GCTGGCTGGC CACCCTGGCC GACCGCGTGG TCGAGCGAGA TTCCTGA
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| Protein sequence | MSASPFDDWM RTALDQVEIE LDRQVPADAP AELGLAMRYG VLDGGKRLRP LLVLAAAGCV
DGHPEAALRA ACAVELIHAY SLIHDDMPCM DNDVLRRGKP TVHVQYGEAR AMLAGDAMQA
LAFEVLTPED TDDGVPPALQ ARLCSLLARA SGVLGMAGGQ AIDLAHVGKQ MDEAALQDMH
GRKTGALLQA SVLMGAACGR TTPAQWQALA DYGWAIGLAF QVVDDILDVT QCAETLGKTA
GKDADQNKPT YVSLLGLEGA RERAQSLHAQ AHAALERGAF ADARWLATLA DRVVERDS
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