| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3340 |
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| Symbol | |
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| ID | 6161253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3717677 |
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| End bp | 3718714 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666115 |
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| Product | 4-hydroxy-2-ketovalerate aldolase |
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| Protein accession | YP_001792363 |
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| Protein GI | 171060014 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR03217] 4-hydroxy-2-oxovalerate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTGC AAGGCAAGAA GATCACCGTC CACGACATGA CGTTGCGGGA TGGCATGCAC
CCGAAGCGTC ATCTGATGAC GCTGGAGCAG ATGAAGAACA TCGCCACCGG CCTGGACGAA
GCGGGCGTGC CGCTGATCGA GGTCACGCAT GGCGACGGGC TGGGCGGCAG CTCGGTCAAC
TACGGCTTTC CGGCCCACAG CGACGAGGAG TATCTCGGCG CCGTGATCCC GCTGATGAAG
CAGGCCAAGA TCTCGGCGCT GCTGCTGCCG GGCATCGGCA CGGTCGAGCA TCTGCACATG
GCCAAGGATC TGGGCGTGCA CACCATCCGC GTGGCGACGC ACTGCACCGA GGCCGACGTC
AGCGAGCAGC ACATCACCGC CGCGCGCAAG CTCGACATGG ACACGGTCGG CTTCCTGATG
ATGGCGCACA TGGCCAGCCC CGAGAAGCTG ATCACGCAGG CCAAGCTGAT GGAAGGCTAC
GGCGCCAACT GCATCTACGT GACCGACTCG GCCGGCTACA TGCTGCCCGG TGACGTGAAG
CTGCGCCTCG AAGCCGTGCG CGCCGCGCTG CGGCCCGAAA CCGAGCTGGG TTTCCACGGC
CACCACAACC TGGCGATGGG CGTGGCGAAC TCGGTGGCTG CGGTCGAGGC CGGCGCCAAC
CGCATCGACG CGGCGGCGGC GGGCCTGGGT GCGGGTGCGG GCAACACGCC GATGGAAGTC
TTCATCGCGG TATGCGATCG CATGGGCATC GAGACCGGCG TCGACGTGTT CAAGATCCAG
GACGTGGCCG AGGACCGGGT CGTGCCGATC ATGGACCACA TCATCCGCGT CGACCGCGAC
TCGCTGACGC TGGGCTACGC GGGCGTGTAT TCGAGCTTCC TGCTGTTCGC CAAGCGGGCC
GAGAAGAAGT ACGGCGTCAG CGCGCGCGAC ATCCTGGTCG AGATGGGCCG CCGCAAGATG
GTGGGCGGCC AGGAAGACAT GATCGAGGAC ACCGCGATCA CGATGGCACG CGAGCGCGCC
GGCTGCGCCG CCGCCTGA
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| Protein sequence | MTVQGKKITV HDMTLRDGMH PKRHLMTLEQ MKNIATGLDE AGVPLIEVTH GDGLGGSSVN
YGFPAHSDEE YLGAVIPLMK QAKISALLLP GIGTVEHLHM AKDLGVHTIR VATHCTEADV
SEQHITAARK LDMDTVGFLM MAHMASPEKL ITQAKLMEGY GANCIYVTDS AGYMLPGDVK
LRLEAVRAAL RPETELGFHG HHNLAMGVAN SVAAVEAGAN RIDAAAAGLG AGAGNTPMEV
FIAVCDRMGI ETGVDVFKIQ DVAEDRVVPI MDHIIRVDRD SLTLGYAGVY SSFLLFAKRA
EKKYGVSARD ILVEMGRRKM VGGQEDMIED TAITMARERA GCAAA
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