| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3335 |
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| Symbol | |
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| ID | 6160769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3713767 |
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| End bp | 3715191 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641666110 |
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| Product | peptidase M48 Ste24p |
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| Protein accession | YP_001792358 |
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| Protein GI | 171060009 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCCC TCTTCAAGCC CGCCCGACCC GCCTTGCGCG CCTTCGCAGC GCGCCTGCAC
GACGGCCGAC CGAACCGGCG CGACATCGGC CTGCTGTTCG GCAGCGCGGC GGGCTTGCTC
GGCGGCTGCG CCAGCCCGGG CGGCGTGCCG CCGACCGGCG ACACGGCCGC ACCGGCTGCG
CGGGCGACCC CGTCGGCATC GCCCGCAGCC CGGCCGCCGC CCAAGCCGGC CCCGATCGAC
GACGCCGGCG CCCGCGCGCT CGACGCGCAG CAGGCGCCGC AGCAGTTCTC GCTCGACCTG
GGCGCGCTGC AGGACGTGGC CATCAACACC TACGTCGGCG AGATCGGCTT CGCCATCCAG
GCCCAGGCGC CGCGGCGTGG CCTGCCCTAC AGCTACCGCG CGCTCAACGC CCACCACCTG
AACGCCTACG CCTTCCCGGC CGGCGGGCTG GGCATCACGC GCGGCCTGCT GATCGAGCTG
CAGGACGAGG CCGAGCTCGC CGCGCTGATC GGCCAGCAGC TCGGCCACGT CAACGCCCGC
CACGCACTGA GCCGCCAGCG CACCGATTCG GTGGCGCAGG CGGTGGTCAC GAACACCGTG
GCGGCCAGCC AGGAATCGGC CTGGACGCCG CCGATCGGGC TGGCCGGACA GATCGGCGCC
AGCGCGCTGA TCCCGACCTA CTCGGCCGAA CAGATGCGCG AGGCCGACGC GGCGGGGCTG
CAGTACCTGG TCGGCGCGGG CTATCCGGGG CTCGGCATGG TGACGCTGCA GCAACGCCTG
GCCGAAGCCG GGCAGCAGCG CCCGGCCCTG CTGGCGGCGA TGGCGGCGGC GCAGCCGACC
AGCCCCGAGC GGCGTGACGC GGTGCGCCGC AACGTCGAGA CCCTGCACGC CGGCAGCCGC
AACAGCAGCA CGCGCCGCGA GCGTTTCATG GACCGCACCG CCAGCCTGCG GCACATGCGC
GCGCTGATCG AGGCCTGCAA GAACGGCGAA CTGGCGCTGG CCCGCAAGGA CCTGACCGAA
GCGCACGCGC AGTTCAAGTC GGCGCTCGAG ATGGCGTCGC AGGACTACGC CGCCAACCTG
CGCATGGCGC AGTGCCTGCA GGCGATGGGG CAGGTGCGCG AGGCGCGTGC ATTCGCGATC
GCCGCGCGCG ACGCCTATCC GCAGGAGGCC CAGGCGCACA AGCTGGCCGC CACGCTGGCA
CTGGCGCAGC GCGACGCCGC CGCCGCCTGG CAGGACCTCG AGGCGCATGA CCGCCTGCTG
TCGGGCGACC CCGGCGTGGT GTTCCTGAAA GGCGTCACAC TTGAGCTCAT GGGACAAAGC
AAACGCGCCG CCGAACACTA CCGCGCCTAC CTCGGCTACA CCGAACAGGG CCAGGCCGCC
CAATACGCCG CCACCCGCCT GAAGCTGCTC GGTCATGACC GCTGA
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| Protein sequence | MDPLFKPARP ALRAFAARLH DGRPNRRDIG LLFGSAAGLL GGCASPGGVP PTGDTAAPAA
RATPSASPAA RPPPKPAPID DAGARALDAQ QAPQQFSLDL GALQDVAINT YVGEIGFAIQ
AQAPRRGLPY SYRALNAHHL NAYAFPAGGL GITRGLLIEL QDEAELAALI GQQLGHVNAR
HALSRQRTDS VAQAVVTNTV AASQESAWTP PIGLAGQIGA SALIPTYSAE QMREADAAGL
QYLVGAGYPG LGMVTLQQRL AEAGQQRPAL LAAMAAAQPT SPERRDAVRR NVETLHAGSR
NSSTRRERFM DRTASLRHMR ALIEACKNGE LALARKDLTE AHAQFKSALE MASQDYAANL
RMAQCLQAMG QVREARAFAI AARDAYPQEA QAHKLAATLA LAQRDAAAAW QDLEAHDRLL
SGDPGVVFLK GVTLELMGQS KRAAEHYRAY LGYTEQGQAA QYAATRLKLL GHDR
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