Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3319 |
Symbol | |
ID | 6163390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3688173 |
End bp | 3689258 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641666094 |
Product | oxidoreductase domain-containing protein |
Protein accession | YP_001792342 |
Protein GI | 171059993 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACCG CCCCGCCTGA CCTGAATGTC GCCCTGATCG GCCACGGCTA CGTCGGCCGC ACCTTCCATG CGCCGCTGAT CCGCAGCGTG CCGGGCCTGA AGCTGGCGCT GATCGCCTCC AGCGACGCTG GCGCCGTGCA GGCCGCCTGG CCGGGCGTGC CGGTCGAGGC CGATTACCTG GCCGCCGCGC AGGCGCCGGG CATCGATCTG GTGGTGATCG CCACGCCCAA CGACAGCCAC CACCCGCTGG CGCGCGCCGC GCTGCTGGCC GGCAAGGCCG TGGTGATCGA CAAGCCGTTC ACCGTGACGC TGGACGAGGC GCAGGACCTG GTGGATCTGG CGCACGAGCG CGGCCAGCTG CTGTCGGTGT TCCACAACCG GCGCTGGGAC GGCGATTTCC TGACCGTGGC GCAGCAGATC CGCAGCGGCG CGATCGGCGA GGTGCGCGAG TTCGTGTCGC GTTTCGACCG CTTCGACCCG ACGCCGCGCG ACCGCTGGCG CGAGCGCCCC GGGCCGGGTT CGGGCCTGTG GTACGACCTC GGACCGCATC TGGTCGATCA GGCGCTGTGC CTGTTCGGCG CGCCCGATCG CATCGGTGCC GATCTGGCCG CCTTGCGCGA CGGCAGCGAC GCGGTCGACT ACGCCCAGGT CACGCTGTTC TACGAACAAC CGCGCCGCCG GATCACGCTG CACTGCACCC GCCTGGCCGC CCTGCCCGGT GCGCGGTTCG AGATCCACGG CCAGCTCGGC AGCCTGGCCT GCCACGGCCT GGACACGCAG GAAGACCAGC TCAAGGCCGG CATGGCGCCC GGCGCCGACG GCTGGGGCGA CGATCCGCGC CCGATCAGCT GGATGGACTG GCGCGACGTG GCCCAGGGCG CCAACACGCG CGTGGAGCGG GCCGCGACCG CCCTGCCCCG CTTGGCAGGC GACTATCGCC ACTACTACGC CGGCATCCGT GATGCGCTGC ATGGCGTCGG CCCGAATCCG GTGCCGGCCG AGCAAGCGCT GTTGACGATG CGGGTGATGG ACGTGGCGAT GCGCAGCTCC GAGCGGGGTC AAACGCTGGC GTTGGGCGGG GGCTGA
|
Protein sequence | MNTAPPDLNV ALIGHGYVGR TFHAPLIRSV PGLKLALIAS SDAGAVQAAW PGVPVEADYL AAAQAPGIDL VVIATPNDSH HPLARAALLA GKAVVIDKPF TVTLDEAQDL VDLAHERGQL LSVFHNRRWD GDFLTVAQQI RSGAIGEVRE FVSRFDRFDP TPRDRWRERP GPGSGLWYDL GPHLVDQALC LFGAPDRIGA DLAALRDGSD AVDYAQVTLF YEQPRRRITL HCTRLAALPG ARFEIHGQLG SLACHGLDTQ EDQLKAGMAP GADGWGDDPR PISWMDWRDV AQGANTRVER AATALPRLAG DYRHYYAGIR DALHGVGPNP VPAEQALLTM RVMDVAMRSS ERGQTLALGG G
|
| |