| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3317 |
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| Symbol | |
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| ID | 6160842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3685961 |
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| End bp | 3686758 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641666092 |
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| Product | myo-inositol catabolism IolB domain-containing protein |
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| Protein accession | YP_001792340 |
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| Protein GI | 171059991 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3718] Uncharacterized enzyme involved in inositol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTTC TCGTCAAGGC CCGCGCGGGC CGTGAAATCT GCGAAGTGAC GCCCGAGTCG
GCCGGCTGGA CGCACGTGGG CTTCAAGGCC CTGCGCCTGG CTGCCGGCGA CAGCGAAAGC
CTGGACACCG GCACGCGCGA GCTGTGCGTG GTGGTGCTGA CCGGCACGGT CGACATCATC
GTGGCCGGCG AGCGATATGC CGCGCTCGGC TCACGCAACA GCGTATTCGA GGAAAAGTCG
CCCGACGCGC TGTATGTGCC GGGCGGCCTG GCCGTCACCA TCAGCGCCAG TCGCGACAGC
GAAGTCGCAC TGTGCAGCGC GCCGAGCAAG GGCGGCAAGG CCGTCAAGCG CCTCGACGGC
GCCAGCCTGC GCCGCAGCGT GCGCGGCCAG GGCAGCAACA CGCGCTATGT GTGCGACATC
CTGCCGCAGG ACGATCCGGC GGCCGACCAC CTGCTGGTGG TCGAGGTGAT CACGCCCGCC
GGCCATTCCA GCAGTTACCC GCCGCACAAG CACGACCGCG ACGCCGCCCC CGAAGAAACC
CTGCTCGAGG AAACTTATTA CCACCGCCTT AATCCGCCGC AGGGTTTTGC ATTTCAGCGC
GTTTACACCG ACGACCGCAG CCTCGACGAG GCCTGCGCGG TCGAAAACCA CGACGTGGTG
ATGGTGCCGC GCGGGTATCA CCCGTGCGTG GCACCGCATG GTTATGACCT TTATTACCTG
AACGTGATGG CCGGGCCCGG CCGGGCGTGG CATTTCAAGA ATGACCCCGC ACATGAATGG
ATGATCCAGG CCAGGTGA
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| Protein sequence | MSLLVKARAG REICEVTPES AGWTHVGFKA LRLAAGDSES LDTGTRELCV VVLTGTVDII
VAGERYAALG SRNSVFEEKS PDALYVPGGL AVTISASRDS EVALCSAPSK GGKAVKRLDG
ASLRRSVRGQ GSNTRYVCDI LPQDDPAADH LLVVEVITPA GHSSSYPPHK HDRDAAPEET
LLEETYYHRL NPPQGFAFQR VYTDDRSLDE ACAVENHDVV MVPRGYHPCV APHGYDLYYL
NVMAGPGRAW HFKNDPAHEW MIQAR
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